Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
GTF2A1P52655 AC005104.2-201ENST00000427818 678 ntBASIC15.6■□□□□ 0.09
GTF2A1P52655 PVRIG2P-201ENST00000435460 978 ntBASIC15.6■□□□□ 0.09
GTF2A1P52655 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GTF2A1P52655 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.6■□□□□ 0.09
GTF2A1P52655 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.6■□□□□ 0.09
GTF2A1P52655 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.6■□□□□ 0.09
GTF2A1P52655 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.6■□□□□ 0.09
GTF2A1P52655 FITM1-202ENST00000559294 800 ntBASIC15.6■□□□□ 0.09
GTF2A1P52655 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.6■□□□□ 0.09
GTF2A1P52655 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.6■□□□□ 0.09
GTF2A1P52655 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GTF2A1P52655 AC010653.2-201ENST00000623505 997 ntBASIC15.6■□□□□ 0.09
GTF2A1P52655 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.6■□□□□ 0.09
GTF2A1P52655 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC15.6■□□□□ 0.09
GTF2A1P52655 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GTF2A1P52655 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GTF2A1P52655 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.6■□□□□ 0.09
GTF2A1P52655 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GTF2A1P52655 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.6■□□□□ 0.09
GTF2A1P52655 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GTF2A1P52655 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
GTF2A1P52655 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GTF2A1P52655 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC15.6■□□□□ 0.09
GTF2A1P52655 AOC4P-203ENST00000566825 2289 ntBASIC15.6■□□□□ 0.09
GTF2A1P52655 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GTF2A1P52655 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.6■□□□□ 0.09
GTF2A1P52655 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
GTF2A1P52655 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GTF2A1P52655 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC15.6■□□□□ 0.09
GTF2A1P52655 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GTF2A1P52655 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
GTF2A1P52655 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
GTF2A1P52655 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GTF2A1P52655 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
GTF2A1P52655 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GTF2A1P52655 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
GTF2A1P52655 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GTF2A1P52655 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC15.59■□□□□ 0.09
GTF2A1P52655 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GTF2A1P52655 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
GTF2A1P52655 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GTF2A1P52655 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GTF2A1P52655 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.59■□□□□ 0.09
GTF2A1P52655 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
GTF2A1P52655 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.59■□□□□ 0.09
GTF2A1P52655 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.59■□□□□ 0.09
GTF2A1P52655 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GTF2A1P52655 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GTF2A1P52655 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.59■□□□□ 0.09
GTF2A1P52655 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GTF2A1P52655 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.59■□□□□ 0.09
GTF2A1P52655 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GTF2A1P52655 TSPY20P-201ENST00000450910 630 ntBASIC15.59■□□□□ 0.09
GTF2A1P52655 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.59■□□□□ 0.09
GTF2A1P52655 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.59■□□□□ 0.09
GTF2A1P52655 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.59■□□□□ 0.09
GTF2A1P52655 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.59■□□□□ 0.09
GTF2A1P52655 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GTF2A1P52655 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GTF2A1P52655 AL157888.1-201ENST00000631930 593 ntBASIC15.59■□□□□ 0.09
GTF2A1P52655 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC15.59■□□□□ 0.09
GTF2A1P52655 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.59■□□□□ 0.09
GTF2A1P52655 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
GTF2A1P52655 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GTF2A1P52655 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GTF2A1P52655 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.59■□□□□ 0.09
GTF2A1P52655 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GTF2A1P52655 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
GTF2A1P52655 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GTF2A1P52655 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.59■□□□□ 0.09
GTF2A1P52655 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
GTF2A1P52655 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GTF2A1P52655 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC15.59■□□□□ 0.09
GTF2A1P52655 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
GTF2A1P52655 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
GTF2A1P52655 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GTF2A1P52655 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
GTF2A1P52655 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
GTF2A1P52655 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
GTF2A1P52655 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
GTF2A1P52655 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.09
GTF2A1P52655 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
GTF2A1P52655 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.58■□□□□ 0.09
GTF2A1P52655 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
GTF2A1P52655 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
GTF2A1P52655 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC15.58■□□□□ 0.08
GTF2A1P52655 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GTF2A1P52655 AP000845.1-201ENST00000581677 2131 ntBASIC15.58■□□□□ 0.08
GTF2A1P52655 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GTF2A1P52655 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GTF2A1P52655 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GTF2A1P52655 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.58■□□□□ 0.08
GTF2A1P52655 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
GTF2A1P52655 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.58■□□□□ 0.08
GTF2A1P52655 MIR1238-201ENST00000408483 83 ntBASIC15.58■□□□□ 0.08
GTF2A1P52655 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.58■□□□□ 0.08
GTF2A1P52655 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.58■□□□□ 0.08
GTF2A1P52655 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.58■□□□□ 0.08
GTF2A1P52655 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms