Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB28P51157 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB28P51157 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB28P51157 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB28P51157 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB28P51157 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.26■□□□□ 0.03
RAB28P51157 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB28P51157 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB28P51157 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RAB28P51157 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB28P51157 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB28P51157 SPDYE19P-201ENST00000338590 713 ntBASIC15.26■□□□□ 0.03
RAB28P51157 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB28P51157 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB28P51157 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB28P51157 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RAB28P51157 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.26■□□□□ 0.03
RAB28P51157 TOMM22P5-201ENST00000416399 439 ntBASIC15.26■□□□□ 0.03
RAB28P51157 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB28P51157 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB28P51157 AC093004.1-201ENST00000508850 424 ntBASIC15.26■□□□□ 0.03
RAB28P51157 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.26■□□□□ 0.03
RAB28P51157 AC004790.1-201ENST00000612686 536 ntBASIC15.26■□□□□ 0.03
RAB28P51157 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB28P51157 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB28P51157 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB28P51157 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB28P51157 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RAB28P51157 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RAB28P51157 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
RAB28P51157 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB28P51157 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB28P51157 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB28P51157 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB28P51157 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB28P51157 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB28P51157 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RAB28P51157 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB28P51157 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RAB28P51157 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB28P51157 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB28P51157 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB28P51157 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB28P51157 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
RAB28P51157 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB28P51157 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB28P51157 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
RAB28P51157 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB28P51157 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB28P51157 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB28P51157 MEP1AP4-201ENST00000423244 1087 ntBASIC15.25■□□□□ 0.03
RAB28P51157 KRT18P64-201ENST00000434946 1219 ntBASIC15.25■□□□□ 0.03
RAB28P51157 AL589987.1-201ENST00000453380 819 ntBASIC15.25■□□□□ 0.03
RAB28P51157 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB28P51157 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.25■□□□□ 0.03
RAB28P51157 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB28P51157 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB28P51157 TPRX2P-201ENST00000535362 881 ntBASIC15.25■□□□□ 0.03
RAB28P51157 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB28P51157 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB28P51157 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB28P51157 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB28P51157 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB28P51157 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB28P51157 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB28P51157 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RAB28P51157 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB28P51157 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
RAB28P51157 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB28P51157 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RAB28P51157 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB28P51157 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
RAB28P51157 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RAB28P51157 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB28P51157 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB28P51157 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB28P51157 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB28P51157 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RAB28P51157 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB28P51157 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB28P51157 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB28P51157 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB28P51157 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB28P51157 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB28P51157 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB28P51157 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.24■□□□□ 0.03
RAB28P51157 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB28P51157 GNAQP1-201ENST00000444815 1067 ntBASIC15.24■□□□□ 0.03
RAB28P51157 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB28P51157 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB28P51157 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB28P51157 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.24■□□□□ 0.03
RAB28P51157 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.24■□□□□ 0.03
RAB28P51157 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.24■□□□□ 0.03
RAB28P51157 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
RAB28P51157 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.24■□□□□ 0.03
RAB28P51157 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.24■□□□□ 0.03
RAB28P51157 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB28P51157 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RAB28P51157 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms