Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CTNNA1P35221 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTNNA1P35221 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTNNA1P35221 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTNNA1P35221 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTNNA1P35221 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTNNA1P35221 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.79■□□□□ 0.28
CTNNA1P35221 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.79■□□□□ 0.28
CTNNA1P35221 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CTNNA1P35221 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTNNA1P35221 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTNNA1P35221 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.79■□□□□ 0.28
CTNNA1P35221 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTNNA1P35221 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTNNA1P35221 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CTNNA1P35221 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTNNA1P35221 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTNNA1P35221 AC018892.3-201ENST00000623986 2499 ntBASIC16.78■□□□□ 0.28
CTNNA1P35221 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTNNA1P35221 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CTNNA1P35221 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTNNA1P35221 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CTNNA1P35221 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.78■□□□□ 0.28
CTNNA1P35221 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CTNNA1P35221 AKAP8P1-201ENST00000434743 1349 ntBASIC16.78■□□□□ 0.28
CTNNA1P35221 BNIP3P1-202ENST00000550043 1585 ntBASIC16.78■□□□□ 0.28
CTNNA1P35221 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTNNA1P35221 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.78■□□□□ 0.28
CTNNA1P35221 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTNNA1P35221 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CTNNA1P35221 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTNNA1P35221 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTNNA1P35221 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTNNA1P35221 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTNNA1P35221 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CTNNA1P35221 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.78■□□□□ 0.28
CTNNA1P35221 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.78■□□□□ 0.28
CTNNA1P35221 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.78■□□□□ 0.28
CTNNA1P35221 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.78■□□□□ 0.28
CTNNA1P35221 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.78■□□□□ 0.28
CTNNA1P35221 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CTNNA1P35221 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTNNA1P35221 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTNNA1P35221 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTNNA1P35221 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTNNA1P35221 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.78■□□□□ 0.28
CTNNA1P35221 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.78■□□□□ 0.28
CTNNA1P35221 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTNNA1P35221 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.78■□□□□ 0.28
CTNNA1P35221 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CTNNA1P35221 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTNNA1P35221 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.78■□□□□ 0.28
CTNNA1P35221 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTNNA1P35221 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTNNA1P35221 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CTNNA1P35221 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CTNNA1P35221 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.78■□□□□ 0.28
CTNNA1P35221 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTNNA1P35221 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTNNA1P35221 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTNNA1P35221 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTNNA1P35221 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTNNA1P35221 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CTNNA1P35221 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTNNA1P35221 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CTNNA1P35221 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTNNA1P35221 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.77■□□□□ 0.28
CTNNA1P35221 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.77■□□□□ 0.28
CTNNA1P35221 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.77■□□□□ 0.28
CTNNA1P35221 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CTNNA1P35221 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTNNA1P35221 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTNNA1P35221 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTNNA1P35221 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTNNA1P35221 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.77■□□□□ 0.28
CTNNA1P35221 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTNNA1P35221 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.77■□□□□ 0.28
CTNNA1P35221 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.77■□□□□ 0.28
CTNNA1P35221 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTNNA1P35221 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTNNA1P35221 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.77■□□□□ 0.28
CTNNA1P35221 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTNNA1P35221 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTNNA1P35221 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTNNA1P35221 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTNNA1P35221 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.77■□□□□ 0.28
CTNNA1P35221 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.77■□□□□ 0.28
CTNNA1P35221 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.77■□□□□ 0.28
CTNNA1P35221 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.77■□□□□ 0.28
CTNNA1P35221 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.77■□□□□ 0.28
CTNNA1P35221 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.77■□□□□ 0.28
CTNNA1P35221 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTNNA1P35221 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTNNA1P35221 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
CTNNA1P35221 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CTNNA1P35221 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTNNA1P35221 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTNNA1P35221 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.77■□□□□ 0.27
CTNNA1P35221 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CTNNA1P35221 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms