Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPS1P31327 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CPS1P31327 POLL-217ENST00000628479 1953 ntTSL 5 BASIC21.85■■□□□ 1.09
CPS1P31327 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPS1P31327 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CPS1P31327 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPS1P31327 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CPS1P31327 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPS1P31327 AP003171.2-201ENST00000528208 925 ntBASIC21.85■■□□□ 1.09
CPS1P31327 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC21.85■■□□□ 1.09
CPS1P31327 RTN3P1-201ENST00000536295 711 ntBASIC21.85■■□□□ 1.09
CPS1P31327 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC21.85■■□□□ 1.09
CPS1P31327 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC21.85■■□□□ 1.09
CPS1P31327 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC21.85■■□□□ 1.09
CPS1P31327 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPS1P31327 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CPS1P31327 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC21.84■■□□□ 1.09
CPS1P31327 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPS1P31327 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC21.84■■□□□ 1.09
CPS1P31327 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CPS1P31327 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC21.84■■□□□ 1.09
CPS1P31327 AC106886.4-201ENST00000623557 2502 ntBASIC21.84■■□□□ 1.09
CPS1P31327 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CPS1P31327 NPPA-201ENST00000376476 728 ntTSL 3 BASIC21.84■■□□□ 1.09
CPS1P31327 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC21.84■■□□□ 1.09
CPS1P31327 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC21.84■■□□□ 1.09
CPS1P31327 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC21.84■■□□□ 1.09
CPS1P31327 AL157792.1-201ENST00000488281 530 ntBASIC21.84■■□□□ 1.09
CPS1P31327 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC21.84■■□□□ 1.09
CPS1P31327 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPS1P31327 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC21.84■■□□□ 1.09
CPS1P31327 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC21.84■■□□□ 1.09
CPS1P31327 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC21.84■■□□□ 1.09
CPS1P31327 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC21.84■■□□□ 1.09
CPS1P31327 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC21.84■■□□□ 1.09
CPS1P31327 AC051619.9-201ENST00000623237 597 ntBASIC21.84■■□□□ 1.09
CPS1P31327 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPS1P31327 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CPS1P31327 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CPS1P31327 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CPS1P31327 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC21.84■■□□□ 1.09
CPS1P31327 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPS1P31327 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPS1P31327 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC21.83■■□□□ 1.09
CPS1P31327 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPS1P31327 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CPS1P31327 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.83■■□□□ 1.09
CPS1P31327 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPS1P31327 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPS1P31327 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPS1P31327 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
CPS1P31327 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CPS1P31327 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPS1P31327 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPS1P31327 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CPS1P31327 B9D1-203ENST00000395615 805 ntTSL 3 BASIC21.83■■□□□ 1.09
CPS1P31327 CMC1-204ENST00000423894 549 ntTSL 2 BASIC21.83■■□□□ 1.09
CPS1P31327 ISCA2P1-201ENST00000425548 448 ntBASIC21.83■■□□□ 1.09
CPS1P31327 DNM1P30-201ENST00000563586 452 ntBASIC21.83■■□□□ 1.09
CPS1P31327 AL022344.2-201ENST00000568976 968 ntBASIC21.83■■□□□ 1.09
CPS1P31327 AP001527.2-201ENST00000614441 631 ntBASIC21.83■■□□□ 1.09
CPS1P31327 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPS1P31327 AC011477.6-201ENST00000604980 1927 ntBASIC21.83■■□□□ 1.09
CPS1P31327 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CPS1P31327 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CPS1P31327 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
CPS1P31327 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.83■■□□□ 1.08
CPS1P31327 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.08
CPS1P31327 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CPS1P31327 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
CPS1P31327 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CPS1P31327 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CPS1P31327 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CPS1P31327 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPS1P31327 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC21.82■■□□□ 1.08
CPS1P31327 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPS1P31327 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CPS1P31327 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CPS1P31327 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
CPS1P31327 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CPS1P31327 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPS1P31327 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPS1P31327 AL138799.1-201ENST00000448213 1675 ntBASIC21.82■■□□□ 1.08
CPS1P31327 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CPS1P31327 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CPS1P31327 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPS1P31327 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPS1P31327 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC21.82■■□□□ 1.08
CPS1P31327 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC21.82■■□□□ 1.08
CPS1P31327 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC21.82■■□□□ 1.08
CPS1P31327 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC21.82■■□□□ 1.08
CPS1P31327 NEU3-205ENST00000531619 582 ntTSL 5 BASIC21.82■■□□□ 1.08
CPS1P31327 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC21.82■■□□□ 1.08
CPS1P31327 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC21.82■■□□□ 1.08
CPS1P31327 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC21.82■■□□□ 1.08
CPS1P31327 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPS1P31327 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPS1P31327 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
CPS1P31327 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC21.82■■□□□ 1.08
CPS1P31327 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms