Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.31□□□□□ -0.28
LMO1P25800 AC097359.3-201ENST00000603982 1210 ntBASIC13.31□□□□□ -0.28
LMO1P25800 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.31□□□□□ -0.28
LMO1P25800 AP001059.3-201ENST00000619053 235 ntBASIC13.31□□□□□ -0.28
LMO1P25800 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.31□□□□□ -0.28
LMO1P25800 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.31□□□□□ -0.28
LMO1P25800 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LMO1P25800 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.31□□□□□ -0.28
LMO1P25800 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LMO1P25800 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LMO1P25800 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LMO1P25800 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LMO1P25800 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LMO1P25800 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LMO1P25800 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LMO1P25800 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.31□□□□□ -0.28
LMO1P25800 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LMO1P25800 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LMO1P25800 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LMO1P25800 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LMO1P25800 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.31□□□□□ -0.28
LMO1P25800 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LMO1P25800 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.31□□□□□ -0.28
LMO1P25800 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LMO1P25800 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LMO1P25800 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
LMO1P25800 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
LMO1P25800 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.3□□□□□ -0.28
LMO1P25800 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.3□□□□□ -0.28
LMO1P25800 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LMO1P25800 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.3□□□□□ -0.28
LMO1P25800 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.3□□□□□ -0.28
LMO1P25800 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.3□□□□□ -0.28
LMO1P25800 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 AC007191.1-201ENST00000623179 2995 ntBASIC13.3□□□□□ -0.28
LMO1P25800 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.3□□□□□ -0.28
LMO1P25800 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
LMO1P25800 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.3□□□□□ -0.28
LMO1P25800 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 AP006288.1-201ENST00000446065 395 ntBASIC13.3□□□□□ -0.28
LMO1P25800 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.3□□□□□ -0.28
LMO1P25800 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.3□□□□□ -0.28
LMO1P25800 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.3□□□□□ -0.28
LMO1P25800 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.3□□□□□ -0.28
LMO1P25800 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
LMO1P25800 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
LMO1P25800 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.3□□□□□ -0.28
LMO1P25800 AL512356.2-201ENST00000546955 174 ntBASIC13.3□□□□□ -0.28
LMO1P25800 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
LMO1P25800 HNRNPUP1-201ENST00000554987 333 ntBASIC13.3□□□□□ -0.28
LMO1P25800 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 RN7SL828P-201ENST00000607615 303 ntBASIC13.3□□□□□ -0.28
LMO1P25800 AL133215.2-201ENST00000609242 977 ntBASIC13.3□□□□□ -0.28
LMO1P25800 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.3□□□□□ -0.28
LMO1P25800 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.3□□□□□ -0.28
LMO1P25800 AC136621.1-201ENST00000624017 2304 ntBASIC13.3□□□□□ -0.28
LMO1P25800 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.3□□□□□ -0.28
LMO1P25800 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.3□□□□□ -0.28
LMO1P25800 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.3□□□□□ -0.28
LMO1P25800 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO1P25800 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO1P25800 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LMO1P25800 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.29□□□□□ -0.28
LMO1P25800 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO1P25800 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.29□□□□□ -0.28
LMO1P25800 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LMO1P25800 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO1P25800 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LMO1P25800 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.29□□□□□ -0.28
LMO1P25800 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
LMO1P25800 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO1P25800 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.29□□□□□ -0.28
LMO1P25800 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO1P25800 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
LMO1P25800 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.29□□□□□ -0.28
LMO1P25800 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO1P25800 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LMO1P25800 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms