Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCG2P13521 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCG2P13521 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCG2P13521 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.18■□□□□ 0.5
SCG2P13521 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCG2P13521 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCG2P13521 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
SCG2P13521 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SCG2P13521 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCG2P13521 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCG2P13521 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCG2P13521 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCG2P13521 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SCG2P13521 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.17■□□□□ 0.5
SCG2P13521 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.17■□□□□ 0.5
SCG2P13521 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
SCG2P13521 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.17■□□□□ 0.5
SCG2P13521 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCG2P13521 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCG2P13521 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCG2P13521 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.17■□□□□ 0.5
SCG2P13521 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
SCG2P13521 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
SCG2P13521 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.17■□□□□ 0.5
SCG2P13521 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SCG2P13521 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
SCG2P13521 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCG2P13521 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SCG2P13521 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.17■□□□□ 0.5
SCG2P13521 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.17■□□□□ 0.5
SCG2P13521 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.17■□□□□ 0.5
SCG2P13521 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCG2P13521 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.17■□□□□ 0.5
SCG2P13521 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SCG2P13521 AC104794.3-201ENST00000566840 1248 ntBASIC18.17■□□□□ 0.5
SCG2P13521 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.17■□□□□ 0.5
SCG2P13521 SRD5A3P1-201ENST00000603021 949 ntBASIC18.17■□□□□ 0.5
SCG2P13521 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.17■□□□□ 0.5
SCG2P13521 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.17■□□□□ 0.5
SCG2P13521 AC004790.1-201ENST00000612686 536 ntBASIC18.17■□□□□ 0.5
SCG2P13521 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.17■□□□□ 0.5
SCG2P13521 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.17■□□□□ 0.5
SCG2P13521 AC105233.6-201ENST00000642093 218 ntBASIC18.17■□□□□ 0.5
SCG2P13521 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCG2P13521 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCG2P13521 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCG2P13521 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SCG2P13521 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
SCG2P13521 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCG2P13521 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCG2P13521 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCG2P13521 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCG2P13521 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCG2P13521 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCG2P13521 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.16■□□□□ 0.5
SCG2P13521 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.16■□□□□ 0.5
SCG2P13521 AC020658.6-201ENST00000623564 1870 ntBASIC18.16■□□□□ 0.5
SCG2P13521 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCG2P13521 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCG2P13521 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCG2P13521 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCG2P13521 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCG2P13521 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCG2P13521 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.16■□□□□ 0.5
SCG2P13521 FAM207CP-201ENST00000443486 507 ntBASIC18.16■□□□□ 0.5
SCG2P13521 AL589987.1-201ENST00000453380 819 ntBASIC18.16■□□□□ 0.5
SCG2P13521 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SCG2P13521 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCG2P13521 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCG2P13521 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.16■□□□□ 0.5
SCG2P13521 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.16■□□□□ 0.5
SCG2P13521 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.16■□□□□ 0.5
SCG2P13521 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCG2P13521 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCG2P13521 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SCG2P13521 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCG2P13521 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.16■□□□□ 0.5
SCG2P13521 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCG2P13521 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCG2P13521 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
SCG2P13521 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCG2P13521 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCG2P13521 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCG2P13521 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCG2P13521 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
SCG2P13521 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SCG2P13521 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCG2P13521 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCG2P13521 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.15■□□□□ 0.5
SCG2P13521 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCG2P13521 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SCG2P13521 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCG2P13521 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCG2P13521 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCG2P13521 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCG2P13521 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCG2P13521 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SCG2P13521 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCG2P13521 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SCG2P13521 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms