Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC092384.3-202ENST00000564646 2873 ntBASIC16.7■□□□□ 0.26
KRT3P12035 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT3P12035 SSR4P1-203ENST00000599569 2260 ntBASIC16.7■□□□□ 0.26
KRT3P12035 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT3P12035 AC105250.1-201ENST00000509378 2057 ntBASIC16.7■□□□□ 0.26
KRT3P12035 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
KRT3P12035 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT3P12035 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT3P12035 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT3P12035 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT3P12035 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT3P12035 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT3P12035 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT3P12035 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT3P12035 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT3P12035 AL079307.3-201ENST00000556114 283 ntBASIC16.7■□□□□ 0.26
KRT3P12035 AC025678.2-201ENST00000562061 970 ntBASIC16.7■□□□□ 0.26
KRT3P12035 AC004449.1-201ENST00000564240 433 ntBASIC16.7■□□□□ 0.26
KRT3P12035 AL589739.1-201ENST00000607720 493 ntBASIC16.7■□□□□ 0.26
KRT3P12035 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT3P12035 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KRT3P12035 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
KRT3P12035 TSPY26P-202ENST00000565928 3884 ntBASIC16.7■□□□□ 0.26
KRT3P12035 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT3P12035 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KRT3P12035 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.7■□□□□ 0.26
KRT3P12035 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT3P12035 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT3P12035 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT3P12035 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
KRT3P12035 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT3P12035 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.7■□□□□ 0.26
KRT3P12035 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT3P12035 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
KRT3P12035 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
KRT3P12035 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT3P12035 MST1L-201ENST00000442552 2185 ntBASIC16.7■□□□□ 0.26
KRT3P12035 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.69■□□□□ 0.26
KRT3P12035 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.69■□□□□ 0.26
KRT3P12035 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
KRT3P12035 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
KRT3P12035 AC136621.1-201ENST00000624017 2304 ntBASIC16.69■□□□□ 0.26
KRT3P12035 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.69■□□□□ 0.26
KRT3P12035 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
KRT3P12035 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
KRT3P12035 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
KRT3P12035 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.69■□□□□ 0.26
KRT3P12035 HIST3H2BA-201ENST00000436555 524 ntBASIC16.69■□□□□ 0.26
KRT3P12035 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.69■□□□□ 0.26
KRT3P12035 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.69■□□□□ 0.26
KRT3P12035 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.69■□□□□ 0.26
KRT3P12035 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.69■□□□□ 0.26
KRT3P12035 HNRNPUP1-201ENST00000554987 333 ntBASIC16.69■□□□□ 0.26
KRT3P12035 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
KRT3P12035 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.69■□□□□ 0.26
KRT3P12035 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.69■□□□□ 0.26
KRT3P12035 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.69■□□□□ 0.26
KRT3P12035 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.69■□□□□ 0.26
KRT3P12035 AC097359.3-201ENST00000603982 1210 ntBASIC16.69■□□□□ 0.26
KRT3P12035 AC139530.3-201ENST00000620344 690 ntBASIC16.69■□□□□ 0.26
KRT3P12035 Z92544.3-201ENST00000624747 417 ntBASIC16.69■□□□□ 0.26
KRT3P12035 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.69■□□□□ 0.26
KRT3P12035 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.69■□□□□ 0.26
KRT3P12035 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.69■□□□□ 0.26
KRT3P12035 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.69■□□□□ 0.26
KRT3P12035 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT3P12035 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT3P12035 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT3P12035 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.68■□□□□ 0.26
KRT3P12035 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
KRT3P12035 CETN4P-206ENST00000642099 2168 ntBASIC16.68■□□□□ 0.26
KRT3P12035 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT3P12035 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT3P12035 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT3P12035 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms