Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 AL139010.1-201ENST00000454878 894 ntBASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 AL365330.1-201ENST00000607459 531 ntBASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 AP005117.1-202ENST00000581724 1908 ntBASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 CRB3P1-201ENST00000449338 276 ntBASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 AC009407.1-201ENST00000568958 598 ntBASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 AC008738.7-201ENST00000609744 511 ntBASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 LINC02228-204ENST00000642115 2962 ntBASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 REXO1L8P-201ENST00000604378 1897 ntBASIC14.38□□□□□ -0.11
TMIGD3P0DMS9 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMIGD3P0DMS9 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMIGD3P0DMS9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TMIGD3P0DMS9 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMIGD3P0DMS9 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.37□□□□□ -0.11
TMIGD3P0DMS9 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
TMIGD3P0DMS9 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TMIGD3P0DMS9 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TMIGD3P0DMS9 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms