Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHGBP05060 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CHGBP05060 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHGBP05060 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHGBP05060 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.93■□□□□ 0.62
CHGBP05060 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHGBP05060 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHGBP05060 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHGBP05060 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.92■□□□□ 0.62
CHGBP05060 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.92■□□□□ 0.62
CHGBP05060 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.92■□□□□ 0.62
CHGBP05060 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHGBP05060 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CHGBP05060 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.92■□□□□ 0.62
CHGBP05060 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHGBP05060 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.92■□□□□ 0.62
CHGBP05060 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.92■□□□□ 0.62
CHGBP05060 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.92■□□□□ 0.62
CHGBP05060 ELK1P1-201ENST00000485699 580 ntBASIC18.92■□□□□ 0.62
CHGBP05060 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.92■□□□□ 0.62
CHGBP05060 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.92■□□□□ 0.62
CHGBP05060 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHGBP05060 AC105233.6-201ENST00000642093 218 ntBASIC18.92■□□□□ 0.62
CHGBP05060 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CHGBP05060 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHGBP05060 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.92■□□□□ 0.62
CHGBP05060 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHGBP05060 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.92■□□□□ 0.62
CHGBP05060 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHGBP05060 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHGBP05060 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CHGBP05060 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHGBP05060 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.92■□□□□ 0.62
CHGBP05060 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CHGBP05060 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHGBP05060 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CHGBP05060 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHGBP05060 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHGBP05060 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CHGBP05060 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHGBP05060 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHGBP05060 AC046158.3-201ENST00000624947 2558 ntBASIC18.91■□□□□ 0.62
CHGBP05060 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHGBP05060 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.91■□□□□ 0.62
CHGBP05060 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHGBP05060 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHGBP05060 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHGBP05060 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CHGBP05060 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.91■□□□□ 0.62
CHGBP05060 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.91■□□□□ 0.62
CHGBP05060 DFFBP1-201ENST00000433250 979 ntBASIC18.91■□□□□ 0.62
CHGBP05060 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.91■□□□□ 0.62
CHGBP05060 RARRES2P5-201ENST00000564013 466 ntBASIC18.91■□□□□ 0.62
CHGBP05060 TP53TG3HP-202ENST00000569755 579 ntBASIC18.91■□□□□ 0.62
CHGBP05060 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CHGBP05060 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.91■□□□□ 0.62
CHGBP05060 AC025048.6-201ENST00000634326 1161 ntBASIC18.91■□□□□ 0.62
CHGBP05060 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHGBP05060 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHGBP05060 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CHGBP05060 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHGBP05060 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHGBP05060 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.91■□□□□ 0.62
CHGBP05060 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHGBP05060 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHGBP05060 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHGBP05060 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHGBP05060 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHGBP05060 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHGBP05060 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHGBP05060 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHGBP05060 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHGBP05060 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHGBP05060 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHGBP05060 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHGBP05060 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHGBP05060 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CHGBP05060 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CHGBP05060 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.9■□□□□ 0.62
CHGBP05060 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.9■□□□□ 0.62
CHGBP05060 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHGBP05060 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.9■□□□□ 0.62
CHGBP05060 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHGBP05060 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHGBP05060 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHGBP05060 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHGBP05060 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHGBP05060 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.9■□□□□ 0.62
CHGBP05060 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.9■□□□□ 0.62
CHGBP05060 AC093004.1-201ENST00000508850 424 ntBASIC18.9■□□□□ 0.62
CHGBP05060 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.9■□□□□ 0.62
CHGBP05060 AC123567.1-201ENST00000548294 1261 ntBASIC18.9■□□□□ 0.62
CHGBP05060 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHGBP05060 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.9■□□□□ 0.62
CHGBP05060 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CHGBP05060 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHGBP05060 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.9■□□□□ 0.62
CHGBP05060 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.9■□□□□ 0.62
CHGBP05060 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHGBP05060 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms