Protein–RNA interactions for Protein: P01615

IGKV2D-28, Immunoglobulin kappa variable 2D-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28P01615 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 KRT18P31-201ENST00000506277 1292 ntBASIC10.53□□□□□ -0.72
IGKV2D-28P01615 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 AC091304.2-201ENST00000564639 760 ntBASIC10.53□□□□□ -0.72
IGKV2D-28P01615 NT5C-211ENST00000582170 653 ntTSL 3 BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 AC004706.3-202ENST00000621574 984 ntBASIC10.53□□□□□ -0.72
IGKV2D-28P01615 AL355877.3-201ENST00000622820 899 ntBASIC10.53□□□□□ -0.72
IGKV2D-28P01615 AP001350.2-201ENST00000625104 1094 ntBASIC10.53□□□□□ -0.72
IGKV2D-28P01615 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 AJ011931.1-201ENST00000618749 2492 ntBASIC10.53□□□□□ -0.72
IGKV2D-28P01615 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 AC009090.5-201ENST00000624886 2285 ntBASIC10.53□□□□□ -0.72
IGKV2D-28P01615 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
IGKV2D-28P01615 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
IGKV2D-28P01615 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
IGKV2D-28P01615 KRT8P44-201ENST00000441609 1350 ntBASIC10.52□□□□□ -0.72
IGKV2D-28P01615 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC10.52□□□□□ -0.72
IGKV2D-28P01615 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
IGKV2D-28P01615 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC10.52□□□□□ -0.72
IGKV2D-28P01615 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
IGKV2D-28P01615 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
IGKV2D-28P01615 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC10.52□□□□□ -0.72
IGKV2D-28P01615 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC10.52□□□□□ -0.72
IGKV2D-28P01615 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
IGKV2D-28P01615 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
IGKV2D-28P01615 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
IGKV2D-28P01615 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC10.52□□□□□ -0.72
IGKV2D-28P01615 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.72
IGKV2D-28P01615 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 DFFB-203ENST00000341385 572 ntTSL 5 BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 DPM2-202ENST00000373110 738 ntTSL 2 BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 ELK2BP-201ENST00000415014 1224 ntBASIC10.52□□□□□ -0.73
IGKV2D-28P01615 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 AC087641.1-201ENST00000557561 1021 ntBASIC10.52□□□□□ -0.73
IGKV2D-28P01615 IRF8-202ENST00000562492 946 ntTSL 3 BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 AF228730.7-201ENST00000641842 219 ntBASIC10.52□□□□□ -0.73
IGKV2D-28P01615 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
IGKV2D-28P01615 AL353732.1-201ENST00000569618 1459 ntBASIC10.52□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms