Protein–RNA interactions for Protein: O95801

TTC4, Tetratricopeptide repeat protein 4, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4O95801 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC4O95801 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TTC4O95801 KRT8P44-201ENST00000441609 1350 ntBASIC16.31■□□□□ 0.2
TTC4O95801 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.31■□□□□ 0.2
TTC4O95801 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC4O95801 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC4O95801 AC002056.1-201ENST00000395613 760 ntBASIC16.31■□□□□ 0.2
TTC4O95801 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.31■□□□□ 0.2
TTC4O95801 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.31■□□□□ 0.2
TTC4O95801 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.31■□□□□ 0.2
TTC4O95801 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TTC4O95801 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.31■□□□□ 0.2
TTC4O95801 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.31■□□□□ 0.2
TTC4O95801 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.31■□□□□ 0.2
TTC4O95801 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TTC4O95801 AC068137.2-201ENST00000605408 478 ntBASIC16.31■□□□□ 0.2
TTC4O95801 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.31■□□□□ 0.2
TTC4O95801 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC4O95801 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TTC4O95801 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.31■□□□□ 0.2
TTC4O95801 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.31■□□□□ 0.2
TTC4O95801 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC4O95801 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TTC4O95801 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC4O95801 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TTC4O95801 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.31■□□□□ 0.2
TTC4O95801 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.31■□□□□ 0.2
TTC4O95801 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC4O95801 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.31■□□□□ 0.2
TTC4O95801 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.3■□□□□ 0.2
TTC4O95801 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TTC4O95801 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC4O95801 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TTC4O95801 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TTC4O95801 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
TTC4O95801 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC4O95801 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TTC4O95801 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.3■□□□□ 0.2
TTC4O95801 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC4O95801 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TTC4O95801 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.3■□□□□ 0.2
TTC4O95801 AC009078.2-202ENST00000463353 338 ntBASIC16.3■□□□□ 0.2
TTC4O95801 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.3■□□□□ 0.2
TTC4O95801 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.3■□□□□ 0.2
TTC4O95801 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.3■□□□□ 0.2
TTC4O95801 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.3■□□□□ 0.2
TTC4O95801 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.3■□□□□ 0.2
TTC4O95801 SNX18-202ENST00000343017 3140 ntBASIC16.3■□□□□ 0.2
TTC4O95801 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC4O95801 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TTC4O95801 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
TTC4O95801 AC013726.1-201ENST00000563747 2285 ntBASIC16.3■□□□□ 0.2
TTC4O95801 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC4O95801 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC4O95801 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC4O95801 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TTC4O95801 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC4O95801 AC126365.1-201ENST00000578585 1514 ntBASIC16.29■□□□□ 0.2
TTC4O95801 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.29■□□□□ 0.2
TTC4O95801 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.29■□□□□ 0.2
TTC4O95801 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TTC4O95801 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.29■□□□□ 0.2
TTC4O95801 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.29■□□□□ 0.2
TTC4O95801 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.29■□□□□ 0.2
TTC4O95801 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.29■□□□□ 0.2
TTC4O95801 AC074386.1-202ENST00000463561 864 ntBASIC16.29■□□□□ 0.2
TTC4O95801 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.29■□□□□ 0.2
TTC4O95801 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.29■□□□□ 0.2
TTC4O95801 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TTC4O95801 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.29■□□□□ 0.2
TTC4O95801 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 PDPK2P-202ENST00000562415 1191 ntBASIC16.29■□□□□ 0.2
TTC4O95801 AC018845.2-201ENST00000568326 409 ntBASIC16.29■□□□□ 0.2
TTC4O95801 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TTC4O95801 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.29■□□□□ 0.2
TTC4O95801 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.29■□□□□ 0.2
TTC4O95801 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC4O95801 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms