Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF253O75346 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF253O75346 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
ZNF253O75346 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF253O75346 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC12.42□□□□□ -0.42
ZNF253O75346 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF253O75346 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
ZNF253O75346 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF253O75346 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.42□□□□□ -0.42
ZNF253O75346 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
ZNF253O75346 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF253O75346 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
ZNF253O75346 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.42□□□□□ -0.42
ZNF253O75346 AKR1C7P-201ENST00000305623 895 ntBASIC12.42□□□□□ -0.42
ZNF253O75346 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF253O75346 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF253O75346 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
ZNF253O75346 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.42□□□□□ -0.42
ZNF253O75346 AC026396.1-201ENST00000419388 421 ntBASIC12.42□□□□□ -0.42
ZNF253O75346 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.42□□□□□ -0.42
ZNF253O75346 FAM185BP-201ENST00000443595 716 ntBASIC12.42□□□□□ -0.42
ZNF253O75346 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF253O75346 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.42□□□□□ -0.42
ZNF253O75346 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.42□□□□□ -0.42
ZNF253O75346 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.42□□□□□ -0.42
ZNF253O75346 AL031055.1-201ENST00000606362 631 ntBASIC12.42□□□□□ -0.42
ZNF253O75346 AL365330.1-201ENST00000607459 531 ntBASIC12.42□□□□□ -0.42
ZNF253O75346 AC005593.1-201ENST00000624894 515 ntBASIC12.42□□□□□ -0.42
ZNF253O75346 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.42□□□□□ -0.42
ZNF253O75346 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF253O75346 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ZNF253O75346 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF253O75346 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
ZNF253O75346 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.42□□□□□ -0.42
ZNF253O75346 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.42□□□□□ -0.42
ZNF253O75346 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF253O75346 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF253O75346 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF253O75346 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.42□□□□□ -0.42
ZNF253O75346 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF253O75346 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ZNF253O75346 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF253O75346 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF253O75346 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
ZNF253O75346 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.42□□□□□ -0.42
ZNF253O75346 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF253O75346 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF253O75346 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF253O75346 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.42□□□□□ -0.42
ZNF253O75346 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
ZNF253O75346 AL109954.1-202ENST00000564051 2148 ntBASIC12.41□□□□□ -0.42
ZNF253O75346 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF253O75346 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
ZNF253O75346 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ZNF253O75346 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ZNF253O75346 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
ZNF253O75346 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF253O75346 HAUS4P1-201ENST00000406739 1145 ntBASIC12.41□□□□□ -0.42
ZNF253O75346 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF253O75346 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF253O75346 UPK3BP1-201ENST00000428678 509 ntBASIC12.41□□□□□ -0.42
ZNF253O75346 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.41□□□□□ -0.42
ZNF253O75346 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF253O75346 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
ZNF253O75346 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
ZNF253O75346 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF253O75346 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF253O75346 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 AL356488.2-201ENST00000602755 427 ntBASIC12.41□□□□□ -0.42
ZNF253O75346 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.41□□□□□ -0.42
ZNF253O75346 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ZNF253O75346 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.41□□□□□ -0.42
ZNF253O75346 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF253O75346 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ZNF253O75346 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.41□□□□□ -0.42
ZNF253O75346 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms