Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
GFRA3O60609 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GFRA3O60609 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GFRA3O60609 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.16■□□□□ 0.02
GFRA3O60609 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.16■□□□□ 0.02
GFRA3O60609 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.16■□□□□ 0.02
GFRA3O60609 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.15■□□□□ 0.02
GFRA3O60609 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.15■□□□□ 0.02
GFRA3O60609 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.15■□□□□ 0.02
GFRA3O60609 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
GFRA3O60609 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
GFRA3O60609 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.15■□□□□ 0.02
GFRA3O60609 RNU1-114P-201ENST00000365297 166 ntBASIC15.15■□□□□ 0.02
GFRA3O60609 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC15.15■□□□□ 0.02
GFRA3O60609 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.15■□□□□ 0.02
GFRA3O60609 PUDPP3-201ENST00000445368 636 ntBASIC15.15■□□□□ 0.02
GFRA3O60609 AC114812.1-204ENST00000449669 728 ntBASIC15.15■□□□□ 0.02
GFRA3O60609 AC124947.2-201ENST00000547118 1133 ntBASIC15.15■□□□□ 0.02
GFRA3O60609 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.15■□□□□ 0.02
GFRA3O60609 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.15■□□□□ 0.02
GFRA3O60609 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.15■□□□□ 0.02
GFRA3O60609 AC073413.1-201ENST00000603927 732 ntBASIC15.15■□□□□ 0.02
GFRA3O60609 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 AC007718.1-201ENST00000621078 280 ntBASIC15.15■□□□□ 0.02
GFRA3O60609 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.15■□□□□ 0.02
GFRA3O60609 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
GFRA3O60609 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
GFRA3O60609 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.15■□□□□ 0.02
GFRA3O60609 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
GFRA3O60609 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 AL133373.2-201ENST00000623187 2828 ntBASIC15.15■□□□□ 0.02
GFRA3O60609 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.15■□□□□ 0.02
GFRA3O60609 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.15■□□□□ 0.02
GFRA3O60609 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GFRA3O60609 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GFRA3O60609 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.14■□□□□ 0.01
GFRA3O60609 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
GFRA3O60609 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.14■□□□□ 0.01
GFRA3O60609 AC012317.2-201ENST00000623305 2251 ntBASIC15.14■□□□□ 0.01
GFRA3O60609 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
GFRA3O60609 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GFRA3O60609 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
GFRA3O60609 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GFRA3O60609 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GFRA3O60609 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GFRA3O60609 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC15.14■□□□□ 0.01
GFRA3O60609 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC15.14■□□□□ 0.01
GFRA3O60609 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC15.14■□□□□ 0.01
GFRA3O60609 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC15.14■□□□□ 0.01
GFRA3O60609 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GFRA3O60609 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC15.14■□□□□ 0.01
GFRA3O60609 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.14■□□□□ 0.01
GFRA3O60609 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC15.14■□□□□ 0.01
GFRA3O60609 POU5F1P2-201ENST00000521750 823 ntBASIC15.14■□□□□ 0.01
GFRA3O60609 AC027139.1-201ENST00000565286 951 ntBASIC15.14■□□□□ 0.01
GFRA3O60609 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC15.14■□□□□ 0.01
GFRA3O60609 AC090164.2-201ENST00000611487 516 ntBASIC15.14■□□□□ 0.01
GFRA3O60609 LINC00431-202ENST00000636375 159 ntBASIC15.14■□□□□ 0.01
GFRA3O60609 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
GFRA3O60609 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GFRA3O60609 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GFRA3O60609 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
GFRA3O60609 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GFRA3O60609 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
GFRA3O60609 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GFRA3O60609 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.14■□□□□ 0.01
GFRA3O60609 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GFRA3O60609 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.14■□□□□ 0.01
GFRA3O60609 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GFRA3O60609 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
GFRA3O60609 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
GFRA3O60609 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GFRA3O60609 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
GFRA3O60609 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GFRA3O60609 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GFRA3O60609 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.13■□□□□ 0.01
GFRA3O60609 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms