Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 AC105250.1-201ENST00000509378 2057 ntBASIC14.11□□□□□ -0.15
TRAF3IP2O43734 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 AC092580.3-201ENST00000430932 139 ntBASIC14.11□□□□□ -0.15
TRAF3IP2O43734 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 AL512361.1-201ENST00000554200 418 ntBASIC14.11□□□□□ -0.15
TRAF3IP2O43734 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 AL158211.3-201ENST00000607385 239 ntBASIC14.11□□□□□ -0.15
TRAF3IP2O43734 MIR6069-201ENST00000620069 79 ntBASIC14.11□□□□□ -0.15
TRAF3IP2O43734 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 AL513477.1-201ENST00000602865 2407 ntBASIC14.11□□□□□ -0.15
TRAF3IP2O43734 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAF3IP2O43734 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 TREML5P-201ENST00000421694 576 ntBASIC14.1□□□□□ -0.15
TRAF3IP2O43734 TARDBPP1-201ENST00000442013 1203 ntBASIC14.1□□□□□ -0.15
TRAF3IP2O43734 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 AC025048.3-201ENST00000590609 569 ntBASIC14.1□□□□□ -0.15
TRAF3IP2O43734 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 AC005702.4-201ENST00000618393 416 ntBASIC14.1□□□□□ -0.15
TRAF3IP2O43734 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAF3IP2O43734 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms