Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
HOXA2O43364 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 KRT8P44-201ENST00000441609 1350 ntBASIC16.81■□□□□ 0.28
HOXA2O43364 AC020907.1-201ENST00000616460 1350 ntBASIC16.81■□□□□ 0.28
HOXA2O43364 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXA2O43364 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HOXA2O43364 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
HOXA2O43364 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.81■□□□□ 0.28
HOXA2O43364 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.81■□□□□ 0.28
HOXA2O43364 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.81■□□□□ 0.28
HOXA2O43364 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.81■□□□□ 0.28
HOXA2O43364 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HOXA2O43364 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXA2O43364 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXA2O43364 MIR6787-201ENST00000616675 61 ntBASIC16.81■□□□□ 0.28
HOXA2O43364 BX539320.1-201ENST00000623759 877 ntBASIC16.81■□□□□ 0.28
HOXA2O43364 AC022211.2-201ENST00000585075 2527 ntBASIC16.81■□□□□ 0.28
HOXA2O43364 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HOXA2O43364 AL138799.1-201ENST00000448213 1675 ntBASIC16.81■□□□□ 0.28
HOXA2O43364 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HOXA2O43364 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXA2O43364 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HOXA2O43364 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA2O43364 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXA2O43364 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXA2O43364 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXA2O43364 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.8■□□□□ 0.28
HOXA2O43364 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXA2O43364 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXA2O43364 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXA2O43364 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXA2O43364 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXA2O43364 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXA2O43364 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXA2O43364 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXA2O43364 AC026954.1-201ENST00000429771 1293 ntBASIC16.8■□□□□ 0.28
HOXA2O43364 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXA2O43364 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXA2O43364 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXA2O43364 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXA2O43364 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HOXA2O43364 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXA2O43364 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXA2O43364 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXA2O43364 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXA2O43364 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXA2O43364 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
HOXA2O43364 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXA2O43364 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXA2O43364 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXA2O43364 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HOXA2O43364 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HOXA2O43364 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HOXA2O43364 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HOXA2O43364 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.79■□□□□ 0.28
HOXA2O43364 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXA2O43364 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXA2O43364 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXA2O43364 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXA2O43364 AC011676.5-201ENST00000624864 2660 ntBASIC16.79■□□□□ 0.28
HOXA2O43364 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HOXA2O43364 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXA2O43364 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.79■□□□□ 0.28
HOXA2O43364 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HOXA2O43364 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HOXA2O43364 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HOXA2O43364 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXA2O43364 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.79■□□□□ 0.28
HOXA2O43364 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXA2O43364 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.79■□□□□ 0.28
HOXA2O43364 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HOXA2O43364 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXA2O43364 RN7SL560P-201ENST00000577943 264 ntBASIC16.79■□□□□ 0.28
HOXA2O43364 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.79■□□□□ 0.28
HOXA2O43364 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.79■□□□□ 0.28
HOXA2O43364 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.79■□□□□ 0.28
HOXA2O43364 AC132938.4-201ENST00000623835 848 ntBASIC16.79■□□□□ 0.28
HOXA2O43364 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXA2O43364 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms