Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
APAF1O14727 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
APAF1O14727 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APAF1O14727 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
APAF1O14727 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
APAF1O14727 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC20.79■□□□□ 0.92
APAF1O14727 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
APAF1O14727 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
APAF1O14727 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
APAF1O14727 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
APAF1O14727 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
APAF1O14727 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APAF1O14727 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APAF1O14727 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APAF1O14727 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APAF1O14727 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APAF1O14727 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APAF1O14727 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
APAF1O14727 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
APAF1O14727 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APAF1O14727 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APAF1O14727 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
APAF1O14727 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APAF1O14727 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
APAF1O14727 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.78■□□□□ 0.92
APAF1O14727 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APAF1O14727 BCRP1-201ENST00000444246 691 ntBASIC20.78■□□□□ 0.92
APAF1O14727 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.78■□□□□ 0.92
APAF1O14727 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC20.78■□□□□ 0.92
APAF1O14727 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.78■□□□□ 0.92
APAF1O14727 RNA5SP421-201ENST00000516864 134 ntBASIC20.78■□□□□ 0.92
APAF1O14727 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC20.78■□□□□ 0.92
APAF1O14727 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.78■□□□□ 0.92
APAF1O14727 SPCS2P1-201ENST00000561636 679 ntBASIC20.78■□□□□ 0.92
APAF1O14727 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.78■□□□□ 0.92
APAF1O14727 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APAF1O14727 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APAF1O14727 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APAF1O14727 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
APAF1O14727 AC013268.4-201ENST00000637413 2228 ntBASIC20.78■□□□□ 0.92
APAF1O14727 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
APAF1O14727 API5-202ENST00000420461 2009 ntTSL 2 BASIC20.78■□□□□ 0.92
APAF1O14727 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
APAF1O14727 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC20.78■□□□□ 0.92
APAF1O14727 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
APAF1O14727 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC20.78■□□□□ 0.92
APAF1O14727 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
APAF1O14727 DEK-201ENST00000244776 1441 ntTSL 2 BASIC20.78■□□□□ 0.92
APAF1O14727 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC20.78■□□□□ 0.92
APAF1O14727 PGR-210ENST00000619228 3038 ntTSL 5 BASIC20.78■□□□□ 0.92
APAF1O14727 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
APAF1O14727 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
APAF1O14727 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
APAF1O14727 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.77■□□□□ 0.92
APAF1O14727 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
APAF1O14727 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
APAF1O14727 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
APAF1O14727 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
APAF1O14727 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC20.77■□□□□ 0.92
APAF1O14727 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
APAF1O14727 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
APAF1O14727 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
APAF1O14727 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
APAF1O14727 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
APAF1O14727 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC20.77■□□□□ 0.92
APAF1O14727 HMGN1P19-201ENST00000436976 333 ntBASIC20.77■□□□□ 0.92
APAF1O14727 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.77■□□□□ 0.92
APAF1O14727 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.77■□□□□ 0.92
APAF1O14727 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
APAF1O14727 AC104794.3-201ENST00000566840 1248 ntBASIC20.77■□□□□ 0.92
APAF1O14727 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.77■□□□□ 0.92
APAF1O14727 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
APAF1O14727 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
APAF1O14727 AC092384.3-202ENST00000564646 2873 ntBASIC20.77■□□□□ 0.92
APAF1O14727 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
APAF1O14727 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC20.77■□□□□ 0.92
APAF1O14727 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.77■□□□□ 0.92
APAF1O14727 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
APAF1O14727 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
APAF1O14727 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
APAF1O14727 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
APAF1O14727 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
APAF1O14727 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APAF1O14727 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
APAF1O14727 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
APAF1O14727 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
APAF1O14727 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
APAF1O14727 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APAF1O14727 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
APAF1O14727 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APAF1O14727 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APAF1O14727 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.76■□□□□ 0.91
APAF1O14727 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC20.76■□□□□ 0.91
APAF1O14727 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC20.76■□□□□ 0.91
APAF1O14727 AC015922.1-201ENST00000421102 1152 ntBASIC20.76■□□□□ 0.91
APAF1O14727 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC20.76■□□□□ 0.91
APAF1O14727 REEP4-207ENST00000523293 913 ntTSL 3 BASIC20.76■□□□□ 0.91
APAF1O14727 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
APAF1O14727 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
APAF1O14727 AC092337.1-201ENST00000568699 1129 ntBASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms