Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL21O00585 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL21O00585 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL21O00585 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CCL21O00585 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
CCL21O00585 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
CCL21O00585 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL21O00585 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL21O00585 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CCL21O00585 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CCL21O00585 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL21O00585 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CCL21O00585 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL21O00585 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL21O00585 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL21O00585 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL21O00585 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL21O00585 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CCL21O00585 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL21O00585 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL21O00585 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
CCL21O00585 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL21O00585 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CCL21O00585 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL21O00585 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL21O00585 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
CCL21O00585 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL21O00585 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
CCL21O00585 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL21O00585 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL21O00585 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.85□□□□□ -0.19
CCL21O00585 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.85□□□□□ -0.19
CCL21O00585 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.85□□□□□ -0.19
CCL21O00585 IGHJ2P-201ENST00000454480 60 ntBASIC13.85□□□□□ -0.19
CCL21O00585 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.85□□□□□ -0.19
CCL21O00585 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.85□□□□□ -0.19
CCL21O00585 RHOQP1-201ENST00000555758 579 ntBASIC13.85□□□□□ -0.19
CCL21O00585 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL21O00585 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL21O00585 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.85□□□□□ -0.19
CCL21O00585 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.85□□□□□ -0.19
CCL21O00585 AC097359.3-201ENST00000603982 1210 ntBASIC13.85□□□□□ -0.19
CCL21O00585 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL21O00585 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL21O00585 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL21O00585 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL21O00585 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CCL21O00585 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL21O00585 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL21O00585 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL21O00585 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CCL21O00585 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL21O00585 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL21O00585 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL21O00585 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL21O00585 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL21O00585 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL21O00585 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CCL21O00585 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL21O00585 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL21O00585 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL21O00585 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL21O00585 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL21O00585 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CCL21O00585 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL21O00585 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL21O00585 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL21O00585 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL21O00585 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL21O00585 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL21O00585 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CCL21O00585 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CCL21O00585 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
CCL21O00585 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CCL21O00585 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL21O00585 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL21O00585 MIR1202-201ENST00000408529 83 ntBASIC13.84□□□□□ -0.19
CCL21O00585 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL21O00585 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL21O00585 AC007969.1-201ENST00000433675 447 ntBASIC13.84□□□□□ -0.19
CCL21O00585 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCL21O00585 AC015910.1-201ENST00000579400 975 ntBASIC13.84□□□□□ -0.19
CCL21O00585 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL21O00585 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL21O00585 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.84□□□□□ -0.19
CCL21O00585 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL21O00585 AC132938.4-201ENST00000623835 848 ntBASIC13.84□□□□□ -0.19
CCL21O00585 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL21O00585 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL21O00585 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL21O00585 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL21O00585 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.84□□□□□ -0.19
CCL21O00585 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL21O00585 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL21O00585 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL21O00585 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL21O00585 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
CCL21O00585 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL21O00585 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL21O00585 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms