Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TVP23AA6NH52 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.21□□□□□ -0.13
TVP23AA6NH52 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.21□□□□□ -0.13
TVP23AA6NH52 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TVP23AA6NH52 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TVP23AA6NH52 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.21□□□□□ -0.13
TVP23AA6NH52 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TVP23AA6NH52 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.21□□□□□ -0.13
TVP23AA6NH52 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.21□□□□□ -0.13
TVP23AA6NH52 AC009090.5-201ENST00000624886 2285 ntBASIC14.21□□□□□ -0.13
TVP23AA6NH52 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TVP23AA6NH52 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.21□□□□□ -0.13
TVP23AA6NH52 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TVP23AA6NH52 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TVP23AA6NH52 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.21□□□□□ -0.13
TVP23AA6NH52 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.21□□□□□ -0.13
TVP23AA6NH52 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TVP23AA6NH52 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TVP23AA6NH52 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TVP23AA6NH52 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TVP23AA6NH52 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TVP23AA6NH52 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TVP23AA6NH52 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TVP23AA6NH52 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TVP23AA6NH52 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.21□□□□□ -0.13
TVP23AA6NH52 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TVP23AA6NH52 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TVP23AA6NH52 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.21□□□□□ -0.13
TVP23AA6NH52 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.21□□□□□ -0.13
TVP23AA6NH52 RNA5SP410-201ENST00000516285 106 ntBASIC14.21□□□□□ -0.13
TVP23AA6NH52 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.21□□□□□ -0.13
TVP23AA6NH52 AC243562.2-201ENST00000561247 970 ntBASIC14.21□□□□□ -0.13
TVP23AA6NH52 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.21□□□□□ -0.13
TVP23AA6NH52 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.21□□□□□ -0.13
TVP23AA6NH52 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TVP23AA6NH52 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.21□□□□□ -0.13
TVP23AA6NH52 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
TVP23AA6NH52 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TVP23AA6NH52 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
TVP23AA6NH52 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TVP23AA6NH52 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TVP23AA6NH52 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TVP23AA6NH52 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TVP23AA6NH52 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TVP23AA6NH52 AL109954.1-202ENST00000564051 2148 ntBASIC14.21□□□□□ -0.13
TVP23AA6NH52 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
TVP23AA6NH52 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TVP23AA6NH52 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TVP23AA6NH52 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.21□□□□□ -0.14
TVP23AA6NH52 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TVP23AA6NH52 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
TVP23AA6NH52 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
TVP23AA6NH52 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
TVP23AA6NH52 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TVP23AA6NH52 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.2□□□□□ -0.14
TVP23AA6NH52 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.2□□□□□ -0.14
TVP23AA6NH52 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TVP23AA6NH52 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TVP23AA6NH52 AC006486.2-201ENST00000624246 2199 ntBASIC14.2□□□□□ -0.14
TVP23AA6NH52 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TVP23AA6NH52 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TVP23AA6NH52 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.2□□□□□ -0.14
TVP23AA6NH52 AKAP8P1-201ENST00000434743 1349 ntBASIC14.2□□□□□ -0.14
TVP23AA6NH52 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
TVP23AA6NH52 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TVP23AA6NH52 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TVP23AA6NH52 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
TVP23AA6NH52 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.2□□□□□ -0.14
TVP23AA6NH52 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TVP23AA6NH52 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TVP23AA6NH52 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TVP23AA6NH52 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TVP23AA6NH52 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TVP23AA6NH52 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.2□□□□□ -0.14
TVP23AA6NH52 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TVP23AA6NH52 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TVP23AA6NH52 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TVP23AA6NH52 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.2□□□□□ -0.14
TVP23AA6NH52 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TVP23AA6NH52 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TVP23AA6NH52 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
TVP23AA6NH52 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.2□□□□□ -0.14
TVP23AA6NH52 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TVP23AA6NH52 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.2□□□□□ -0.14
TVP23AA6NH52 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.2□□□□□ -0.14
TVP23AA6NH52 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.2□□□□□ -0.14
TVP23AA6NH52 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.2□□□□□ -0.14
TVP23AA6NH52 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.2□□□□□ -0.14
TVP23AA6NH52 FAM197Y3-203ENST00000618346 717 ntBASIC14.2□□□□□ -0.14
TVP23AA6NH52 AC008267.7-201ENST00000624570 1194 ntBASIC14.2□□□□□ -0.14
TVP23AA6NH52 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.2□□□□□ -0.14
TVP23AA6NH52 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.2□□□□□ -0.14
TVP23AA6NH52 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.2□□□□□ -0.14
TVP23AA6NH52 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.2□□□□□ -0.14
TVP23AA6NH52 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.2□□□□□ -0.14
TVP23AA6NH52 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TVP23AA6NH52 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.2□□□□□ -0.14
TVP23AA6NH52 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TVP23AA6NH52 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
TVP23AA6NH52 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms