Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 AC005912.2-201ENST00000619492 2400 ntBASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
MEIS3P1A6NDR6 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 AC005840.4-201ENST00000541242 2494 ntBASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 FGFR3P6-201ENST00000457012 610 ntBASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 AC008608.2-201ENST00000606089 416 ntBASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 AL031055.1-201ENST00000606362 631 ntBASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 AC021097.1-201ENST00000607902 574 ntBASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 AL355877.3-201ENST00000622820 899 ntBASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.65□□□□□ -0.22
MEIS3P1A6NDR6 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
MEIS3P1A6NDR6 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms