Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 FAM45BP-202ENST00000592932 1624 ntBASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 LINC01144-201ENST00000626198 1710 ntBASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 AC008677.1-201ENST00000519230 1561 ntBASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 UXT-AS1-201ENST00000590504 1525 ntBASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 AL353732.1-201ENST00000569618 1459 ntBASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 AC092474.2-201ENST00000424288 719 ntBASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 FAM86C2P-203ENST00000528684 1004 ntBASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 AL096865.1-201ENST00000606796 927 ntBASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 AC126755.1-201ENST00000525846 6405 ntBASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX49Q9Y6V7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 TOP3BP1-201ENST00000420768 1380 ntBASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 AC006486.2-201ENST00000624246 2199 ntBASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 RNU1-129P-201ENST00000384064 167 ntBASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 SLC25A39P2-201ENST00000537614 270 ntBASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 U1.21-201ENST00000580816 167 ntBASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
DDX49Q9Y6V7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms