Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.08■□□□□ 0.48
CLIC4Q9Y696 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.08■□□□□ 0.48
CLIC4Q9Y696 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLIC4Q9Y696 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
CLIC4Q9Y696 MST1L-201ENST00000442552 2185 ntBASIC18.08■□□□□ 0.48
CLIC4Q9Y696 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLIC4Q9Y696 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLIC4Q9Y696 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.08■□□□□ 0.48
CLIC4Q9Y696 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.08■□□□□ 0.48
CLIC4Q9Y696 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLIC4Q9Y696 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLIC4Q9Y696 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLIC4Q9Y696 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.08■□□□□ 0.48
CLIC4Q9Y696 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLIC4Q9Y696 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLIC4Q9Y696 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLIC4Q9Y696 TCAF2P1-201ENST00000291129 2421 ntBASIC18.08■□□□□ 0.48
CLIC4Q9Y696 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 AC136604.1-201ENST00000418535 575 ntBASIC18.07■□□□□ 0.48
CLIC4Q9Y696 BX842568.4-201ENST00000421222 227 ntBASIC18.07■□□□□ 0.48
CLIC4Q9Y696 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLIC4Q9Y696 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 MIR3687-2-201ENST00000577708 61 ntBASIC18.06■□□□□ 0.48
CLIC4Q9Y696 MIR4453-201ENST00000584019 89 ntBASIC18.06■□□□□ 0.48
CLIC4Q9Y696 AC004835.2-201ENST00000603762 682 ntBASIC18.06■□□□□ 0.48
CLIC4Q9Y696 RN7SL828P-201ENST00000607615 303 ntBASIC18.06■□□□□ 0.48
CLIC4Q9Y696 MIR3687-1-201ENST00000614492 61 ntBASIC18.06■□□□□ 0.48
CLIC4Q9Y696 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.06■□□□□ 0.48
CLIC4Q9Y696 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.06■□□□□ 0.48
CLIC4Q9Y696 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms