Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 KRT8P37-201ENST00000451609 1420 ntBASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 AL512384.1-201ENST00000406683 331 ntBASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 GNAQP1-201ENST00000444815 1067 ntBASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 HYMAI-201ENST00000635591 3347 ntBASIC14.17□□□□□ -0.14
FOXD3Q9UJU5 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 DGCR5-201ENST00000399539 862 ntBASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 TIMM17BP1-201ENST00000545713 516 ntBASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 AC074044.1-201ENST00000609673 707 ntBASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms