Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 AC007064.4-201ENST00000637740 555 ntBASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 AL645728.2-201ENST00000641974 660 ntBASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 KRT8P39-201ENST00000396270 1433 ntBASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CALCOCO1Q9P1Z2 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 RNU1-129P-201ENST00000384064 167 ntBASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 FAM58CP-201ENST00000435741 640 ntBASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 AP002472.1-201ENST00000577490 586 ntBASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 U1.21-201ENST00000580816 167 ntBASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 AL139011.1-202ENST00000642063 584 ntBASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CALCOCO1Q9P1Z2 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 AL603832.2-201ENST00000566195 2125 ntBASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 AC074386.1-202ENST00000463561 864 ntBASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CALCOCO1Q9P1Z2 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms