Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
CALYQ9NYX4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CALYQ9NYX4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 DNAJB3-202ENST00000449667 1266 ntBASIC13.14□□□□□ -0.31
CALYQ9NYX4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CALYQ9NYX4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 MIR4453-201ENST00000584019 89 ntBASIC13.14□□□□□ -0.31
CALYQ9NYX4 RN7SL828P-201ENST00000607615 303 ntBASIC13.14□□□□□ -0.31
CALYQ9NYX4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CALYQ9NYX4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CALYQ9NYX4 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CALYQ9NYX4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CALYQ9NYX4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CALYQ9NYX4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CALYQ9NYX4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CALYQ9NYX4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CALYQ9NYX4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
CALYQ9NYX4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CALYQ9NYX4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 AC092384.3-202ENST00000564646 2873 ntBASIC13.13□□□□□ -0.31
CALYQ9NYX4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 AZGP1P1-201ENST00000411909 902 ntBASIC13.13□□□□□ -0.31
CALYQ9NYX4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 LINC00628-201ENST00000628516 1289 ntBASIC13.13□□□□□ -0.31
CALYQ9NYX4 MIR600HG-201ENST00000449175 5984 ntBASIC13.13□□□□□ -0.31
CALYQ9NYX4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.13□□□□□ -0.31
CALYQ9NYX4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.13□□□□□ -0.31
CALYQ9NYX4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CALYQ9NYX4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.12□□□□□ -0.31
CALYQ9NYX4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CALYQ9NYX4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CALYQ9NYX4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.12□□□□□ -0.31
CALYQ9NYX4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CALYQ9NYX4 AC087481.3-201ENST00000602886 1894 ntBASIC13.12□□□□□ -0.31
CALYQ9NYX4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.12□□□□□ -0.31
CALYQ9NYX4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CALYQ9NYX4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 181.7 ms