Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 TUBA1B-208ENST00000552984 574 ntTSL 413.93□□□□□ -0.183e-9■□□□□ 8.9
XRN2Q9H0D6 TUBA1B-201ENST00000332858 3198 ntTSL 1 (best)13.28□□□□□ -0.283e-9■□□□□ 8.9
XRN2Q9H0D6 TUBA1B-204ENST00000547765 1875 ntTSL 513.22□□□□□ -0.293e-9■□□□□ 8.9
XRN2Q9H0D6 TUBA1B-206ENST00000550367 835 ntTSL 312.02□□□□□ -0.493e-9■□□□□ 8.9
XRN2Q9H0D6 TUBA1B-207ENST00000551324 840 ntTSL 212.02□□□□□ -0.493e-9■□□□□ 8.9
XRN2Q9H0D6 FDFT1-206ENST00000525571 810 ntTSL 322.76■■□□□ 1.236e-9■□□□□ 8.9
XRN2Q9H0D6 CLCN7-208ENST00000564968 652 ntTSL 419.68■□□□□ 0.746e-9■□□□□ 8.9
XRN2Q9H0D6 CLCN7-206ENST00000563822 851 ntTSL 517.48■□□□□ 0.396e-9■□□□□ 8.9
XRN2Q9H0D6 FDFT1-205ENST00000525551 327 ntTSL 316.48■□□□□ 0.236e-9■□□□□ 8.9
XRN2Q9H0D6 FDFT1-211ENST00000527045 642 ntTSL 1 (best)11.2□□□□□ -0.626e-9■□□□□ 8.9
XRN2Q9H0D6 AL662899.3-203ENST00000409691 1903 ntTSL 315.58■□□□□ 0.094e-12■□□□□ 8.9
XRN2Q9H0D6 LY6G5B-208ENST00000409525 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.384e-12■□□□□ 8.9
XRN2Q9H0D6 LY6G5B-207ENST00000375864 2654 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.584e-12■□□□□ 8.9
XRN2Q9H0D6 SHMT2-206ENST00000553529 562 ntTSL 421.78■■□□□ 1.086e-7■□□□□ 8.9
XRN2Q9H0D6 SHMT2-204ENST00000553324 566 ntTSL 418.03■□□□□ 0.486e-7■□□□□ 8.9
XRN2Q9H0D6 SHMT2-235ENST00000557740 569 ntTSL 417.68■□□□□ 0.426e-7■□□□□ 8.9
XRN2Q9H0D6 SHMT2-210ENST00000553950 584 ntTSL 216.17■□□□□ 0.186e-7■□□□□ 8.9
XRN2Q9H0D6 SHMT2-234ENST00000557703 542 ntTSL 415.72■□□□□ 0.116e-7■□□□□ 8.9
XRN2Q9H0D6 SHMT2-221ENST00000555773 600 ntTSL 214.02□□□□□ -0.176e-7■□□□□ 8.9
XRN2Q9H0D6 SHMT2-224ENST00000556737 572 ntTSL 212.3□□□□□ -0.446e-7■□□□□ 8.9
XRN2Q9H0D6 TRAP1-203ENST00000570403 521 ntTSL 426.95■■□□□ 1.97e-13■□□□□ 8.8
XRN2Q9H0D6 TRAP1-205ENST00000571011 480 ntTSL 525.63■■□□□ 1.697e-13■□□□□ 8.8
XRN2Q9H0D6 GREB1-203ENST00000381483 2347 ntTSL 1 (best) BASIC9.76□□□□□ -0.855e-7■□□□□ 8.8
XRN2Q9H0D6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.158e-7■□□□□ 8.8
XRN2Q9H0D6 PQLC1-210ENST00000589452 704 ntTSL 534.53■■■■□ 3.124e-7■□□□□ 8.8
XRN2Q9H0D6 PQLC1-214ENST00000593030 764 ntTSL 531.28■■■□□ 2.64e-7■□□□□ 8.8
XRN2Q9H0D6 PKDCC-207ENST00000485578 563 ntTSL 216.54■□□□□ 0.244e-7■□□□□ 8.8
XRN2Q9H0D6 PKDCC-209ENST00000492861 693 ntTSL 213.57□□□□□ -0.244e-7■□□□□ 8.8
XRN2Q9H0D6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.282e-6■□□□□ 8.8
XRN2Q9H0D6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.232e-6■□□□□ 8.8
XRN2Q9H0D6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.891e-15■□□□□ 8.8
XRN2Q9H0D6 GMPR-203ENST00000543191 675 ntTSL 211.77□□□□□ -0.531e-15■□□□□ 8.8
XRN2Q9H0D6 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.733e-9■□□□□ 8.8
XRN2Q9H0D6 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.733e-9■□□□□ 8.8
XRN2Q9H0D6 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.733e-9■□□□□ 8.8
XRN2Q9H0D6 CSNK1G2-206ENST00000589861 756 ntTSL 528.32■■■□□ 2.121e-10■□□□□ 8.8
XRN2Q9H0D6 EPAS1-202ENST00000449347 1067 ntTSL 323.07■■□□□ 1.281e-10■□□□□ 8.8
XRN2Q9H0D6 EPAS1-207ENST00000467888 665 ntTSL 522.97■■□□□ 1.271e-10■□□□□ 8.8
XRN2Q9H0D6 TLE1-204ENST00000418319 936 ntTSL 517.19■□□□□ 0.341e-10■□□□□ 8.8
XRN2Q9H0D6 EPAS1-203ENST00000460015 558 ntTSL 416.57■□□□□ 0.241e-10■□□□□ 8.8
XRN2Q9H0D6 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.031e-10■□□□□ 8.8
XRN2Q9H0D6 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.221e-10■□□□□ 8.8
XRN2Q9H0D6 SERPINF1-204ENST00000571149 431 ntTSL 320.35■□□□□ 0.852e-6■□□□□ 8.8
XRN2Q9H0D6 SERPINF1-205ENST00000571360 478 ntTSL 318.74■□□□□ 0.592e-6■□□□□ 8.8
XRN2Q9H0D6 SERPINF1-206ENST00000571870 739 ntTSL 218.28■□□□□ 0.522e-6■□□□□ 8.8
XRN2Q9H0D6 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.252e-6■□□□□ 8.8
XRN2Q9H0D6 DOT1L-205ENST00000478937 638 ntTSL 316.31■□□□□ 0.24e-6■□□□□ 8.8
XRN2Q9H0D6 SH3BP2-229ENST00000515802 2247 ntTSL 215.48■□□□□ 0.074e-6■□□□□ 8.8
XRN2Q9H0D6 SERPINF1-210ENST00000573770 789 ntTSL 314.51□□□□□ -0.092e-6■□□□□ 8.8
XRN2Q9H0D6 SERPINF1-211ENST00000576406 795 ntTSL 313.73□□□□□ -0.212e-6■□□□□ 8.8
XRN2Q9H0D6 SH3BP2-209ENST00000504450 844 ntTSL 511.4□□□□□ -0.584e-6■□□□□ 8.8
XRN2Q9H0D6 SH3BP2-217ENST00000510204 3617 ntTSL 211.33□□□□□ -0.64e-6■□□□□ 8.8
XRN2Q9H0D6 LONP1-204ENST00000586617 471 ntTSL 530.27■■■□□ 2.442e-6■□□□□ 8.8
XRN2Q9H0D6 LONP1-214ENST00000591321 913 ntTSL 322.38■■□□□ 1.172e-6■□□□□ 8.8
XRN2Q9H0D6 SLC3A2-213ENST00000539458 565 ntTSL 519.98■□□□□ 0.793e-9■□□□□ 8.8
XRN2Q9H0D6 SLC3A2-211ENST00000538084 741 ntTSL 318.57■□□□□ 0.563e-9■□□□□ 8.8
XRN2Q9H0D6 ZNF277-207ENST00000457808 891 ntTSL 518.32■□□□□ 0.528e-28■□□□□ 8.8
XRN2Q9H0D6 ZNF277-202ENST00000361946 1736 ntTSL 1 (best)18.15■□□□□ 0.58e-28■□□□□ 8.8
XRN2Q9H0D6 ZNF277-205ENST00000425229 617 ntTSL 316.44■□□□□ 0.228e-28■□□□□ 8.8
XRN2Q9H0D6 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.088e-28■□□□□ 8.8
XRN2Q9H0D6 ZNF277-206ENST00000450657 1075 ntTSL 1 (best) BASIC12.76□□□□□ -0.378e-28■□□□□ 8.8
XRN2Q9H0D6 ZNF277-203ENST00000421043 2218 ntTSL 2 BASIC10.81□□□□□ -0.688e-28■□□□□ 8.8
XRN2Q9H0D6 RN7SKP187-201ENST00000365536 330 ntBASIC8.41□□□□□ -1.068e-28■□□□□ 8.8
XRN2Q9H0D6 ITIH3-201ENST00000416872 2220 ntTSL 2 BASIC11.22□□□□□ -0.618e-7■□□□□ 8.8
XRN2Q9H0D6 ITIH3-202ENST00000449956 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.958e-7■□□□□ 8.8
XRN2Q9H0D6 ITIH3-211ENST00000621946 3038 ntTSL 1 (best) BASIC8.84□□□□□ -0.998e-7■□□□□ 8.8
XRN2Q9H0D6 HDLBP-238ENST00000479894 840 ntTSL 519.52■□□□□ 0.727e-8■□□□□ 8.8
XRN2Q9H0D6 HDLBP-239ENST00000483086 620 ntTSL 314.44□□□□□ -0.17e-8■□□□□ 8.8
XRN2Q9H0D6 HDLBP-232ENST00000470482 624 ntTSL 214.09□□□□□ -0.157e-8■□□□□ 8.8
XRN2Q9H0D6 HDLBP-241ENST00000487169 4339 ntTSL 213.58□□□□□ -0.237e-8■□□□□ 8.8
XRN2Q9H0D6 HDLBP-202ENST00000373292 3297 ntTSL 511.68□□□□□ -0.547e-8■□□□□ 8.8
XRN2Q9H0D6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.13■□□□□ 0.972e-7■□□□□ 8.8
XRN2Q9H0D6 MFGE8-214ENST00000560937 801 ntTSL 220.54■□□□□ 0.882e-7■□□□□ 8.8
XRN2Q9H0D6 MFGE8-206ENST00000558029 849 ntTSL 320.21■□□□□ 0.832e-7■□□□□ 8.8
XRN2Q9H0D6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.8■□□□□ 0.62e-7■□□□□ 8.8
XRN2Q9H0D6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.512e-7■□□□□ 8.8
XRN2Q9H0D6 MFGE8-205ENST00000558018 1989 ntTSL 217.46■□□□□ 0.392e-7■□□□□ 8.8
XRN2Q9H0D6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.352e-7■□□□□ 8.8
XRN2Q9H0D6 SNRPG-207ENST00000480370 487 ntTSL 213.36□□□□□ -0.272e-7■□□□□ 8.8
XRN2Q9H0D6 LDLR-214ENST00000560628 535 ntTSL 312.32□□□□□ -0.442e-7■□□□□ 8.8
XRN2Q9H0D6 SNRPG-203ENST00000429728 566 ntTSL 211.46□□□□□ -0.572e-7■□□□□ 8.8
XRN2Q9H0D6 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.82e-7■□□□□ 8.8
XRN2Q9H0D6 SNRPG-209ENST00000488400 393 ntTSL 29.03□□□□□ -0.962e-7■□□□□ 8.8
XRN2Q9H0D6 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.44□□□□□ -1.72e-7■□□□□ 8.8
XRN2Q9H0D6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.47■□□□□ 0.712e-8■□□□□ 8.8
XRN2Q9H0D6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.342e-8■□□□□ 8.8
XRN2Q9H0D6 ANXA4-204ENST00000460439 543 ntTSL 415.94■□□□□ 0.142e-8■□□□□ 8.8
XRN2Q9H0D6 ANXA4-212ENST00000635311 1492 ntTSL 215.27■□□□□ 0.032e-8■□□□□ 8.8
XRN2Q9H0D6 ANXA4-211ENST00000487351 552 ntTSL 215.02■□□□□ -02e-8■□□□□ 8.8
XRN2Q9H0D6 ANXA4-205ENST00000460942 576 ntTSL 514.49□□□□□ -0.092e-8■□□□□ 8.8
XRN2Q9H0D6 SERPINF1-202ENST00000570731 459 ntTSL 513.77□□□□□ -0.212e-8■□□□□ 8.8
XRN2Q9H0D6 ANXA4-201ENST00000394295 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.432e-8■□□□□ 8.8
XRN2Q9H0D6 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.032e-8■□□□□ 8.8
XRN2Q9H0D6 ANXA4-209ENST00000477632 3949 ntTSL 1 (best)8.52□□□□□ -1.052e-8■□□□□ 8.8
XRN2Q9H0D6 ANXA4-203ENST00000418066 905 ntTSL 38.14□□□□□ -1.112e-8■□□□□ 8.8
XRN2Q9H0D6 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.85□□□□□ -1.152e-8■□□□□ 8.8
XRN2Q9H0D6 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC7.85□□□□□ -1.152e-8■□□□□ 8.8
XRN2Q9H0D6 TIAM2-213ENST00000535064 768 ntTSL 57.57□□□□□ -1.22e-8■□□□□ 8.8
XRN2Q9H0D6 TIAM2-207ENST00000460692 1194 ntTSL 24.71□□□□□ -1.662e-8■□□□□ 8.8
XRN2Q9H0D6 TIAM2-205ENST00000449545 2025 ntTSL 24.71□□□□□ -1.662e-8■□□□□ 8.8
Retrieved 100 of 21,068 protein–RNA pairs in 204.4 ms