RNA–Protein interactions for RNA: ENST00000510204.5

SH3BP2-217, Transcript of SH3 domain binding protein 2, humanhuman

TSL 2

Gene SH3BP2, Length 3,617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-217ENST00000510204 NISCHQ9Y2I1 1504 aa21.78■■□□□ 1.08
SH3BP2-217ENST00000510204 PELP1Q8IZL8 1130 aaKnown RBP21.07■□□□□ 0.96
SH3BP2-217ENST00000510204 MYT1Q01538 1121 aa20.64■□□□□ 0.9
SH3BP2-217ENST00000510204 TTBK1Q5TCY1 1321 aaPredicted RBP19.79■□□□□ 0.76
SH3BP2-217ENST00000510204 HRCP23327 699 aa19.78■□□□□ 0.76
SH3BP2-217ENST00000510204 PRKCSHP14314 528 aaPredicted RBP19.63■□□□□ 0.73
SH3BP2-217ENST00000510204 SCAF1Q9H7N4 1312 aaKnown RBP19.52■□□□□ 0.72
SH3BP2-217ENST00000510204 PPARGC1BQ86YN6 1023 aaKnown RBP19.38■□□□□ 0.69
SH3BP2-217ENST00000510204 SHROOM4Q9ULL8 1493 aa19.35■□□□□ 0.69
SH3BP2-217ENST00000510204 BCL11AQ9H165 835 aa19.25■□□□□ 0.67
SH3BP2-217ENST00000510204 FAM9AQ8IZU1 332 aaPredicted RBP19.07■□□□□ 0.64
SH3BP2-217ENST00000510204 SUPT5HO00267 1087 aaKnown RBP19.04■□□□□ 0.64
SH3BP2-217ENST00000510204 DCAF8L2P0C7V8 631 aa19.04■□□□□ 0.64
SH3BP2-217ENST00000510204 ERICH6Q7L0X2 663 aa19.02■□□□□ 0.63
SH3BP2-217ENST00000510204 APLP2Q06481 763 aa19.01■□□□□ 0.63
SH3BP2-217ENST00000510204 PCGF6Q9BYE7 350 aa18.82■□□□□ 0.6
SH3BP2-217ENST00000510204 SLC24A1O60721 1099 aa18.65■□□□□ 0.58
SH3BP2-217ENST00000510204 CENPBP07199 599 aaPredicted RBP18.64■□□□□ 0.57
SH3BP2-217ENST00000510204 ACIN1Q9UKV3 1341 aaKnown RBP18.57■□□□□ 0.56
SH3BP2-217ENST00000510204 MYO15BQ96JP2 1530 aa18.54■□□□□ 0.56
SH3BP2-217ENST00000510204 GTF3C3Q9Y5Q9 886 aa18.52■□□□□ 0.56
SH3BP2-217ENST00000510204 CHIC1Q5VXU3 224 aa18.51■□□□□ 0.55
SH3BP2-217ENST00000510204 NEUROD1Q13562 356 aa18.49■□□□□ 0.55
SH3BP2-217ENST00000510204 DCAF1Q9Y4B6 1507 aa18.41■□□□□ 0.54
SH3BP2-217ENST00000510204 ZCCHC6Q5VYS8 1495 aaKnown RBP18.34■□□□□ 0.53
SH3BP2-217ENST00000510204 ZEB1P37275 1124 aaPredicted RBP18.3■□□□□ 0.52
SH3BP2-217ENST00000510204 ANP32EQ9BTT0 268 aa18.29■□□□□ 0.52
SH3BP2-217ENST00000510204 TRIM26Q12899 539 aaPredicted RBP18.27■□□□□ 0.52
SH3BP2-217ENST00000510204 CCDC180Q9P1Z9 1646 aa18.19■□□□□ 0.5
SH3BP2-217ENST00000510204 CSRNP3Q8WYN3 585 aa18.18■□□□□ 0.5
SH3BP2-217ENST00000510204 LOC105371045A0A1W2PR82 267 aa18.02■□□□□ 0.48
SH3BP2-217ENST00000510204 DAXXQ9UER7 740 aaPredicted RBP17.96■□□□□ 0.47
SH3BP2-217ENST00000510204 EIF5BO60841 1220 aaKnown RBP17.96■□□□□ 0.46
SH3BP2-217ENST00000510204 ANO8Q9HCE9 1232 aaPredicted RBP17.94■□□□□ 0.46
SH3BP2-217ENST00000510204 EHMT2Q96KQ7 1210 aa17.84■□□□□ 0.45
SH3BP2-217ENST00000510204 UBE2Q2Q8WVN8 375 aa17.75■□□□□ 0.43
SH3BP2-217ENST00000510204 PLEKHG5O94827 1062 aa17.74■□□□□ 0.43
SH3BP2-217ENST00000510204 TSHZ2Q9NRE2 1034 aa17.59■□□□□ 0.41
SH3BP2-217ENST00000510204 SCRIBQ14160 1630 aa17.58■□□□□ 0.4
SH3BP2-217ENST00000510204 TRIM41Q8WV44 630 aa17.54■□□□□ 0.4
SH3BP2-217ENST00000510204 ABCC9O60706 1549 aa17.54■□□□□ 0.4
SH3BP2-217ENST00000510204 SALL2Q9Y467 1007 aaPredicted RBP17.53■□□□□ 0.4
SH3BP2-217ENST00000510204 DIEXFQ68CQ4 756 aaKnown RBP17.52■□□□□ 0.39
SH3BP2-217ENST00000510204 CCDC136Q96JN2 1154 aa17.5■□□□□ 0.39
SH3BP2-217ENST00000510204 CCER1Q8TC90 406 aaPredicted RBP17.46■□□□□ 0.38
SH3BP2-217ENST00000510204 YTHDC1Q96MU7 727 aaKnown RBP17.43■□□□□ 0.38
SH3BP2-217ENST00000510204 PODXL2Q9NZ53 605 aa17.4■□□□□ 0.38
SH3BP2-217ENST00000510204 PKNOX2Q96KN3 472 aa17.39■□□□□ 0.37
SH3BP2-217ENST00000510204 RSF1Q96T23 1441 aaPredicted RBP17.37■□□□□ 0.37
SH3BP2-217ENST00000510204 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.37■□□□□ 0.37
SH3BP2-217ENST00000510204 SUPT16HQ9Y5B9 1047 aaKnown RBP17.27■□□□□ 0.36
SH3BP2-217ENST00000510204 CECR2Q9BXF3 1484 aa17.22■□□□□ 0.35
SH3BP2-217ENST00000510204 RB1CC1Q8TDY2 1594 aa17.21■□□□□ 0.35
SH3BP2-217ENST00000510204 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.18■□□□□ 0.34
SH3BP2-217ENST00000510204 ZNF316A6NFI3 1004 aaPredicted RBP17.17■□□□□ 0.34
SH3BP2-217ENST00000510204 ERICH6BQ5W0A0 696 aa17.16■□□□□ 0.34
SH3BP2-217ENST00000510204 DEKP35659 375 aaKnown RBP17.14■□□□□ 0.33
SH3BP2-217ENST00000510204 MSH5O43196 834 aa17.07■□□□□ 0.32
SH3BP2-217ENST00000510204 MROH2BQ7Z745 1585 aa17.06■□□□□ 0.32
SH3BP2-217ENST00000510204 CLSPNQ9HAW4 1339 aa17.05■□□□□ 0.32
SH3BP2-217ENST00000510204 RBM19Q9Y4C8 960 aaKnown RBP17.04■□□□□ 0.32
SH3BP2-217ENST00000510204 PABPN1Q86U42 306 aaKnown RBP eCLIP17.01■□□□□ 0.311e-6■■□□□ 13.4
SH3BP2-217ENST00000510204 MYT1LQ9UL68 1186 aa17.01■□□□□ 0.31
SH3BP2-217ENST00000510204 MIER1Q8N108 512 aa16.98■□□□□ 0.31
SH3BP2-217ENST00000510204 NACADO15069 1562 aa16.98■□□□□ 0.31
SH3BP2-217ENST00000510204 WIZO95785 1651 aa16.97■□□□□ 0.31
SH3BP2-217ENST00000510204 RTN4Q9NQC3 1192 aaKnown RBP16.88■□□□□ 0.29
SH3BP2-217ENST00000510204 IL27Q8NEV9 243 aa16.87■□□□□ 0.29
SH3BP2-217ENST00000510204 WRNQ14191 1432 aaPredicted RBP eCLIP16.84■□□□□ 0.29
SH3BP2-217ENST00000510204 UBTFP17480 764 aaKnown RBP16.84■□□□□ 0.29
SH3BP2-217ENST00000510204 RANGAP1P46060 587 aaPredicted RBP16.84■□□□□ 0.29
SH3BP2-217ENST00000510204 NEFLP07196 543 aa16.79■□□□□ 0.28
SH3BP2-217ENST00000510204 BCANQ96GW7 911 aa16.75■□□□□ 0.27
SH3BP2-217ENST00000510204 ABCC8Q09428 1581 aa16.75■□□□□ 0.27
SH3BP2-217ENST00000510204 AEBP2Q6ZN18 517 aaPredicted RBP16.73■□□□□ 0.27
SH3BP2-217ENST00000510204 PDE4CQ08493 712 aa16.72■□□□□ 0.27
SH3BP2-217ENST00000510204 ZMYND15Q9H091 742 aa16.71■□□□□ 0.27
SH3BP2-217ENST00000510204 BAZ1AQ9NRL2 1556 aaPredicted RBP16.71■□□□□ 0.26
SH3BP2-217ENST00000510204 FANCIQ9NVI1 1328 aa16.69■□□□□ 0.26
SH3BP2-217ENST00000510204 CEP162Q5TB80 1403 aa16.68■□□□□ 0.26
SH3BP2-217ENST00000510204 CCDC88BA6NC98 1476 aa16.67■□□□□ 0.26
SH3BP2-217ENST00000510204 A0A0U1RQG5 324 aaPredicted RBP16.67■□□□□ 0.26
SH3BP2-217ENST00000510204 PDIA4P13667 645 aaKnown RBP16.66■□□□□ 0.26
SH3BP2-217ENST00000510204 SOGA1O94964 1423 aa16.64■□□□□ 0.25
SH3BP2-217ENST00000510204 FGD1P98174 961 aa16.62■□□□□ 0.25
SH3BP2-217ENST00000510204 TNIKQ9UKE5 1360 aa16.6■□□□□ 0.25
SH3BP2-217ENST00000510204 VSIG10Q8N0Z9 540 aa16.59■□□□□ 0.25
SH3BP2-217ENST00000510204 HNRNPUL2Q1KMD3 747 aaKnown RBP16.58■□□□□ 0.25
SH3BP2-217ENST00000510204 KLHL34Q8N239 644 aa16.58■□□□□ 0.24
SH3BP2-217ENST00000510204 TIMELESSQ9UNS1 1208 aa16.58■□□□□ 0.24
SH3BP2-217ENST00000510204 NBR1Q14596 966 aa16.56■□□□□ 0.24
SH3BP2-217ENST00000510204 RUSC2Q8N2Y8 1516 aa16.56■□□□□ 0.24
SH3BP2-217ENST00000510204 GLIPR1L2Q4G1C9 344 aa16.56■□□□□ 0.24
SH3BP2-217ENST00000510204 SMARCA4P51532 1647 aa16.55■□□□□ 0.24
SH3BP2-217ENST00000510204 BCL11BQ9C0K0 894 aaPredicted RBP16.55■□□□□ 0.24
SH3BP2-217ENST00000510204 TOP2AP11388 1531 aaKnown RBP16.54■□□□□ 0.24
SH3BP2-217ENST00000510204 FKBP8Q14318 412 aa16.52■□□□□ 0.24
SH3BP2-217ENST00000510204 AAMPQ13685 434 aa16.51■□□□□ 0.23
SH3BP2-217ENST00000510204 RBM10P98175 930 aaKnown RBP16.5■□□□□ 0.23
SH3BP2-217ENST00000510204 ITGAEP38570 1179 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms