Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.1□□□□□ -0.47
VGLL1Q99990 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.1□□□□□ -0.47
VGLL1Q99990 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
VGLL1Q99990 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
VGLL1Q99990 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
VGLL1Q99990 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
VGLL1Q99990 AP001282.1-201ENST00000531301 1499 ntBASIC12.09□□□□□ -0.47
VGLL1Q99990 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.09□□□□□ -0.47
VGLL1Q99990 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.09□□□□□ -0.47
VGLL1Q99990 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.09□□□□□ -0.47
VGLL1Q99990 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
VGLL1Q99990 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.09□□□□□ -0.47
VGLL1Q99990 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.09□□□□□ -0.47
VGLL1Q99990 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.09□□□□□ -0.47
VGLL1Q99990 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
VGLL1Q99990 AL450487.1-201ENST00000426799 995 ntBASIC12.09□□□□□ -0.47
VGLL1Q99990 AC009947.1-201ENST00000444350 727 ntBASIC12.09□□□□□ -0.47
VGLL1Q99990 HCG4B-203ENST00000450128 991 ntBASIC12.09□□□□□ -0.47
VGLL1Q99990 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
VGLL1Q99990 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.09□□□□□ -0.47
VGLL1Q99990 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.09□□□□□ -0.47
VGLL1Q99990 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.09□□□□□ -0.47
VGLL1Q99990 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.09□□□□□ -0.47
VGLL1Q99990 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.09□□□□□ -0.47
VGLL1Q99990 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.09□□□□□ -0.47
VGLL1Q99990 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.09□□□□□ -0.47
VGLL1Q99990 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.09□□□□□ -0.47
VGLL1Q99990 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.09□□□□□ -0.47
VGLL1Q99990 MIR7706-201ENST00000613747 67 ntBASIC12.09□□□□□ -0.47
VGLL1Q99990 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC12.09□□□□□ -0.47
VGLL1Q99990 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.09□□□□□ -0.47
VGLL1Q99990 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.09□□□□□ -0.47
VGLL1Q99990 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.09□□□□□ -0.47
VGLL1Q99990 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.09□□□□□ -0.47
VGLL1Q99990 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
VGLL1Q99990 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.09□□□□□ -0.47
VGLL1Q99990 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.09□□□□□ -0.47
VGLL1Q99990 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VGLL1Q99990 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.08□□□□□ -0.47
VGLL1Q99990 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.08□□□□□ -0.47
VGLL1Q99990 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.08□□□□□ -0.47
VGLL1Q99990 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
VGLL1Q99990 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VGLL1Q99990 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.08□□□□□ -0.48
VGLL1Q99990 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
VGLL1Q99990 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.08□□□□□ -0.48
VGLL1Q99990 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VGLL1Q99990 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
VGLL1Q99990 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VGLL1Q99990 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
VGLL1Q99990 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
VGLL1Q99990 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
VGLL1Q99990 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VGLL1Q99990 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
VGLL1Q99990 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
VGLL1Q99990 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VGLL1Q99990 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VGLL1Q99990 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.08□□□□□ -0.48
VGLL1Q99990 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
VGLL1Q99990 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.08□□□□□ -0.48
VGLL1Q99990 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
VGLL1Q99990 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms