Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 VAMP1-204ENST00000535180 747 ntTSL 3 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 AC022001.3-201ENST00000606330 596 ntBASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE2Q8WXH0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 AP001979.1-201ENST00000529222 751 ntBASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 APRT-202ENST00000426324 664 ntTSL 2 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 ABCD1P3-201ENST00000562927 605 ntBASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 AC007952.4-201ENST00000573866 637 ntBASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 MIR5193-201ENST00000584510 109 ntBASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 AL157813.1-201ENST00000612996 587 ntBASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 PNLIPRP2-201ENST00000579578 1482 ntAPPRIS P5 TSL 2 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 NCR3-202ENST00000376071 541 ntTSL 5 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 MBP-230ENST00000528160 584 ntTSL 5 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 AC132812.1-201ENST00000583145 892 ntBASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 RN7SL202P-201ENST00000584410 262 ntBASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 ANO7L1-203ENST00000602586 1720 ntBASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 AC135776.1-201ENST00000319817 2481 ntBASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 AC104961.1-201ENST00000427605 771 ntBASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 PSME3-213ENST00000592169 826 ntTSL 3 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SYNE2Q8WXH0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SYNE2Q8WXH0 AC074338.1-201ENST00000416825 156 ntBASIC6.18□□□□□ -1.42
SYNE2Q8WXH0 SNRPCP15-201ENST00000424055 192 ntBASIC6.18□□□□□ -1.42
SYNE2Q8WXH0 TSPY25P-201ENST00000429463 745 ntBASIC6.18□□□□□ -1.42
SYNE2Q8WXH0 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC6.18□□□□□ -1.42
SYNE2Q8WXH0 METTL7AP1-201ENST00000547343 496 ntBASIC6.18□□□□□ -1.42
SYNE2Q8WXH0 ABCC6P1-203ENST00000565566 1170 ntBASIC6.18□□□□□ -1.42
SYNE2Q8WXH0 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC6.18□□□□□ -1.42
SYNE2Q8WXH0 AC106782.5-201ENST00000616011 337 ntBASIC6.18□□□□□ -1.42
SYNE2Q8WXH0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms