Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 AC005562.1-201ENST00000583030 3219 ntBASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 MIR600HG-201ENST00000449175 5984 ntBASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD2Q8IV50 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 AC097376.2-205ENST00000610159 5334 ntBASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 AC011474.4-201ENST00000623523 2076 ntBASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 FAM8A3P-201ENST00000427218 844 ntBASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 AL671277.2-201ENST00000458060 996 ntBASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 AC073592.4-201ENST00000623827 446 ntBASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 AC097493.4-201ENST00000641197 219 ntBASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 Z82170.1-201ENST00000625081 3192 ntBASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.97□□□□□ -0.17
LYSMD2Q8IV50 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 AL353732.1-201ENST00000569618 1459 ntBASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 AC063952.2-201ENST00000498792 1227 ntBASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD2Q8IV50 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LYSMD2Q8IV50 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
LYSMD2Q8IV50 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
LYSMD2Q8IV50 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LYSMD2Q8IV50 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LYSMD2Q8IV50 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms