Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 MIR658-201ENST00000385210 100 ntBASIC17.63■□□□□ 0.41
TRIM50Q86XT4 TOMM22P5-201ENST00000416399 439 ntBASIC17.63■□□□□ 0.41
TRIM50Q86XT4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 AC106886.1-201ENST00000568660 600 ntBASIC17.63■□□□□ 0.41
TRIM50Q86XT4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 MIR6752-201ENST00000618442 71 ntBASIC17.63■□□□□ 0.41
TRIM50Q86XT4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM50Q86XT4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 MIR648-201ENST00000385046 94 ntBASIC17.62■□□□□ 0.41
TRIM50Q86XT4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 AL442647.2-201ENST00000429864 857 ntBASIC17.62■□□□□ 0.41
TRIM50Q86XT4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 AC022210.1-201ENST00000449856 793 ntBASIC17.62■□□□□ 0.41
TRIM50Q86XT4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 SNX29P1-201ENST00000548357 1007 ntBASIC17.62■□□□□ 0.41
TRIM50Q86XT4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 BRI3BPP1-201ENST00000594224 787 ntBASIC17.62■□□□□ 0.41
TRIM50Q86XT4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM50Q86XT4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 USP32P1-208ENST00000506594 1164 ntBASIC17.61■□□□□ 0.41
TRIM50Q86XT4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 MIR4259-201ENST00000584466 101 ntBASIC17.61■□□□□ 0.41
TRIM50Q86XT4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 CU634019.7-201ENST00000624153 1185 ntBASIC17.61■□□□□ 0.41
TRIM50Q86XT4 FP236241.2-201ENST00000624906 1185 ntBASIC17.61■□□□□ 0.41
TRIM50Q86XT4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms