Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 AC026150.2-201ENST00000564693 1156 ntBASIC13.12□□□□□ -0.31
TREML4Q6UXN2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.12□□□□□ -0.31
TREML4Q6UXN2 UXT-AS1-201ENST00000590504 1525 ntBASIC13.12□□□□□ -0.31
TREML4Q6UXN2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 AC013268.4-201ENST00000637413 2228 ntBASIC13.12□□□□□ -0.31
TREML4Q6UXN2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TREML4Q6UXN2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 AC063926.3-201ENST00000624734 5658 ntBASIC13.11□□□□□ -0.31
TREML4Q6UXN2 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 PKD1P5-201ENST00000532415 10291 ntBASIC13.11□□□□□ -0.31
TREML4Q6UXN2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 MIR6080-201ENST00000617359 66 ntBASIC13.11□□□□□ -0.31
TREML4Q6UXN2 AC006213.5-201ENST00000619673 288 ntBASIC13.11□□□□□ -0.31
TREML4Q6UXN2 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 METTL15-211ENST00000634762 718 ntTSL 5 BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 AL645728.2-201ENST00000641974 660 ntBASIC13.11□□□□□ -0.31
TREML4Q6UXN2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 AC129492.6-201ENST00000611383 1305 ntBASIC13.11□□□□□ -0.31
TREML4Q6UXN2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TREML4Q6UXN2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TREML4Q6UXN2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.1□□□□□ -0.31
TREML4Q6UXN2 NORAD-201ENST00000565493 5339 ntBASIC13.1□□□□□ -0.31
TREML4Q6UXN2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREML4Q6UXN2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREML4Q6UXN2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREML4Q6UXN2 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREML4Q6UXN2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREML4Q6UXN2 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREML4Q6UXN2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREML4Q6UXN2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.1□□□□□ -0.31
TREML4Q6UXN2 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREML4Q6UXN2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREML4Q6UXN2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREML4Q6UXN2 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC13.1□□□□□ -0.31
TREML4Q6UXN2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TREML4Q6UXN2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.1□□□□□ -0.31
TREML4Q6UXN2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TREML4Q6UXN2 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms