Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 DDT-204ENST00000404092 805 ntTSL 3 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 AC092474.2-201ENST00000424288 719 ntBASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 AC243562.2-201ENST00000561247 970 ntBASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 PRELID1P1-202ENST00000567272 903 ntBASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 MIR4751-201ENST00000578027 74 ntBASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 MIR4313-201ENST00000580760 101 ntBASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 ZBTB45P2-201ENST00000452245 1531 ntBASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
LINC00242Q5T6M2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00242Q5T6M2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms