Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDH1Q08174 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH1Q08174 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDH1Q08174 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
PCDH1Q08174 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH1Q08174 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH1Q08174 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDH1Q08174 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDH1Q08174 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.3■□□□□ 0.04
PCDH1Q08174 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
PCDH1Q08174 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PCDH1Q08174 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PCDH1Q08174 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDH1Q08174 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
PCDH1Q08174 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 MIR4453-201ENST00000584019 89 ntBASIC15.3■□□□□ 0.04
PCDH1Q08174 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.3■□□□□ 0.04
PCDH1Q08174 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDH1Q08174 AC003101.2-201ENST00000612557 442 ntBASIC15.3■□□□□ 0.04
PCDH1Q08174 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDH1Q08174 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDH1Q08174 AC099063.4-201ENST00000641099 1602 ntBASIC15.3■□□□□ 0.04
PCDH1Q08174 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDH1Q08174 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH1Q08174 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDH1Q08174 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDH1Q08174 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDH1Q08174 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PCDH1Q08174 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PCDH1Q08174 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PCDH1Q08174 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
PCDH1Q08174 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PCDH1Q08174 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.29■□□□□ 0.04
PCDH1Q08174 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDH1Q08174 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PCDH1Q08174 AL645939.2-201ENST00000427340 991 ntBASIC15.29■□□□□ 0.04
PCDH1Q08174 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDH1Q08174 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PCDH1Q08174 AL079307.3-201ENST00000556114 283 ntBASIC15.29■□□□□ 0.04
PCDH1Q08174 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDH1Q08174 AC006538.3-201ENST00000612495 578 ntBASIC15.29■□□□□ 0.04
PCDH1Q08174 AC139530.3-201ENST00000620344 690 ntBASIC15.29■□□□□ 0.04
PCDH1Q08174 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PCDH1Q08174 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDH1Q08174 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDH1Q08174 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PCDH1Q08174 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 CICP13-201ENST00000422015 2789 ntBASIC15.29■□□□□ 0.04
PCDH1Q08174 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDH1Q08174 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH1Q08174 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDH1Q08174 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDH1Q08174 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH1Q08174 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDH1Q08174 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms