Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 FGFR3P6-201ENST00000457012 610 ntBASIC12.98□□□□□ -0.33
RAB11AP62491 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.98□□□□□ -0.33
RAB11AP62491 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB11AP62491 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB11AP62491 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.98□□□□□ -0.33
RAB11AP62491 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RAB11AP62491 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RAB11AP62491 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RAB11AP62491 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.98□□□□□ -0.33
RAB11AP62491 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RAB11AP62491 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.98□□□□□ -0.33
RAB11AP62491 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB11AP62491 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB11AP62491 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.98□□□□□ -0.33
RAB11AP62491 LINC01101-201ENST00000622953 1884 ntBASIC12.97□□□□□ -0.33
RAB11AP62491 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB11AP62491 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB11AP62491 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB11AP62491 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB11AP62491 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB11AP62491 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB11AP62491 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB11AP62491 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB11AP62491 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.97□□□□□ -0.33
RAB11AP62491 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB11AP62491 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.97□□□□□ -0.33
RAB11AP62491 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
RAB11AP62491 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.97□□□□□ -0.33
RAB11AP62491 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB11AP62491 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
RAB11AP62491 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.97□□□□□ -0.33
RAB11AP62491 MMP17-203ENST00000535004 719 ntTSL 3 BASIC12.97□□□□□ -0.33
RAB11AP62491 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB11AP62491 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.97□□□□□ -0.33
RAB11AP62491 LINC01711-201ENST00000598340 967 ntBASIC12.97□□□□□ -0.33
RAB11AP62491 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB11AP62491 MIR1199-201ENST00000621445 119 ntBASIC12.97□□□□□ -0.33
RAB11AP62491 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.97□□□□□ -0.33
RAB11AP62491 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.97□□□□□ -0.33
RAB11AP62491 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB11AP62491 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB11AP62491 AC008677.1-201ENST00000519230 1561 ntBASIC12.97□□□□□ -0.33
RAB11AP62491 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB11AP62491 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
RAB11AP62491 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
RAB11AP62491 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAB11AP62491 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAB11AP62491 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.97□□□□□ -0.33
RAB11AP62491 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB11AP62491 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAB11AP62491 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
RAB11AP62491 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB11AP62491 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RAB11AP62491 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
RAB11AP62491 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB11AP62491 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB11AP62491 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB11AP62491 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB11AP62491 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB11AP62491 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB11AP62491 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB11AP62491 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB11AP62491 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RAB11AP62491 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB11AP62491 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
RAB11AP62491 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.96□□□□□ -0.33
RAB11AP62491 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB11AP62491 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RAB11AP62491 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB11AP62491 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB11AP62491 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB11AP62491 CICP23-201ENST00000605013 2741 ntBASIC12.96□□□□□ -0.33
RAB11AP62491 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
RAB11AP62491 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12.96□□□□□ -0.33
RAB11AP62491 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RAB11AP62491 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB11AP62491 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB11AP62491 PMS2P4-201ENST00000412466 1052 ntBASIC12.96□□□□□ -0.33
RAB11AP62491 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.96□□□□□ -0.33
RAB11AP62491 AC136632.2-201ENST00000512891 861 ntBASIC12.96□□□□□ -0.33
RAB11AP62491 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
RAB11AP62491 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB11AP62491 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.96□□□□□ -0.33
RAB11AP62491 AL365330.1-201ENST00000607459 531 ntBASIC12.96□□□□□ -0.33
RAB11AP62491 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.96□□□□□ -0.33
RAB11AP62491 AC107918.4-202ENST00000641623 219 ntBASIC12.96□□□□□ -0.33
RAB11AP62491 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
RAB11AP62491 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB11AP62491 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.96□□□□□ -0.33
RAB11AP62491 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB11AP62491 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms