Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 REM2-202ENST00000536884 1331 ntTSL 2 BASIC11.35□□□□□ -0.59
UBE2D3P61077 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
UBE2D3P61077 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
UBE2D3P61077 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 AC015656.1-201ENST00000624209 3578 ntBASIC11.35□□□□□ -0.59
UBE2D3P61077 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC11.35□□□□□ -0.59
UBE2D3P61077 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
UBE2D3P61077 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
UBE2D3P61077 BEX3-201ENST00000361298 921 ntTSL 2 BASIC11.35□□□□□ -0.59
UBE2D3P61077 AC002056.1-201ENST00000395613 760 ntBASIC11.35□□□□□ -0.59
UBE2D3P61077 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
UBE2D3P61077 MDH2-205ENST00000461263 648 ntTSL 2 BASIC11.35□□□□□ -0.59
UBE2D3P61077 AC009078.2-202ENST00000463353 338 ntBASIC11.35□□□□□ -0.59
UBE2D3P61077 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
UBE2D3P61077 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.35□□□□□ -0.59
UBE2D3P61077 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
UBE2D3P61077 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
UBE2D3P61077 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC11.35□□□□□ -0.59
UBE2D3P61077 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
UBE2D3P61077 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
UBE2D3P61077 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC11.35□□□□□ -0.59
UBE2D3P61077 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC11.35□□□□□ -0.59
UBE2D3P61077 AC005840.4-201ENST00000541242 2494 ntBASIC11.35□□□□□ -0.59
UBE2D3P61077 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.59
UBE2D3P61077 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
UBE2D3P61077 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
UBE2D3P61077 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
UBE2D3P61077 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC11.35□□□□□ -0.59
UBE2D3P61077 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
UBE2D3P61077 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC11.35□□□□□ -0.59
UBE2D3P61077 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
UBE2D3P61077 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
UBE2D3P61077 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UBE2D3P61077 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
UBE2D3P61077 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC11.34□□□□□ -0.59
UBE2D3P61077 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D3P61077 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC11.34□□□□□ -0.59
UBE2D3P61077 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC11.34□□□□□ -0.59
UBE2D3P61077 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D3P61077 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
UBE2D3P61077 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D3P61077 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D3P61077 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D3P61077 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D3P61077 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D3P61077 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC11.34□□□□□ -0.59
UBE2D3P61077 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC11.34□□□□□ -0.59
UBE2D3P61077 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
UBE2D3P61077 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
UBE2D3P61077 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
UBE2D3P61077 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D3P61077 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D3P61077 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D3P61077 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D3P61077 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
UBE2D3P61077 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D3P61077 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D3P61077 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D3P61077 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC11.34□□□□□ -0.59
UBE2D3P61077 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC11.34□□□□□ -0.59
UBE2D3P61077 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC11.34□□□□□ -0.59
UBE2D3P61077 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D3P61077 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
UBE2D3P61077 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC11.34□□□□□ -0.59
UBE2D3P61077 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D3P61077 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D3P61077 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D3P61077 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC11.34□□□□□ -0.59
UBE2D3P61077 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC11.34□□□□□ -0.59
UBE2D3P61077 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC11.34□□□□□ -0.59
UBE2D3P61077 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UBE2D3P61077 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC11.34□□□□□ -0.59
UBE2D3P61077 AC074386.1-202ENST00000463561 864 ntBASIC11.34□□□□□ -0.59
UBE2D3P61077 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC11.34□□□□□ -0.59
UBE2D3P61077 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC11.34□□□□□ -0.59
UBE2D3P61077 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
UBE2D3P61077 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms