Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CLDN20P56880 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.59□□□□□ -0.07
CLDN20P56880 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CLDN20P56880 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.59□□□□□ -0.07
CLDN20P56880 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.59□□□□□ -0.07
CLDN20P56880 HMGN1P19-201ENST00000436976 333 ntBASIC14.59□□□□□ -0.07
CLDN20P56880 MTND6P24-201ENST00000440466 518 ntBASIC14.59□□□□□ -0.07
CLDN20P56880 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.59□□□□□ -0.07
CLDN20P56880 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CLDN20P56880 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.59□□□□□ -0.07
CLDN20P56880 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.59□□□□□ -0.07
CLDN20P56880 AC105021.1-202ENST00000570572 669 ntBASIC14.59□□□□□ -0.07
CLDN20P56880 MIR4321-201ENST00000592276 80 ntBASIC14.59□□□□□ -0.07
CLDN20P56880 AC005498.2-205ENST00000593218 784 ntBASIC14.59□□□□□ -0.07
CLDN20P56880 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
CLDN20P56880 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.59□□□□□ -0.07
CLDN20P56880 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.59□□□□□ -0.07
CLDN20P56880 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CLDN20P56880 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.59□□□□□ -0.07
CLDN20P56880 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CLDN20P56880 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.59□□□□□ -0.07
CLDN20P56880 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.59□□□□□ -0.07
CLDN20P56880 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CLDN20P56880 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CLDN20P56880 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN20P56880 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CLDN20P56880 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CLDN20P56880 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.58□□□□□ -0.07
CLDN20P56880 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CLDN20P56880 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CLDN20P56880 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.58□□□□□ -0.07
CLDN20P56880 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.58□□□□□ -0.07
CLDN20P56880 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.58□□□□□ -0.07
CLDN20P56880 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
CLDN20P56880 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CLDN20P56880 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CLDN20P56880 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN20P56880 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN20P56880 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN20P56880 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN20P56880 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN20P56880 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN20P56880 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN20P56880 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.58□□□□□ -0.08
CLDN20P56880 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CLDN20P56880 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN20P56880 MIR770-201ENST00000390219 98 ntBASIC14.58□□□□□ -0.08
CLDN20P56880 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN20P56880 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN20P56880 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.58□□□□□ -0.08
CLDN20P56880 AC069120.2-201ENST00000524091 540 ntBASIC14.58□□□□□ -0.08
CLDN20P56880 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.58□□□□□ -0.08
CLDN20P56880 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.58□□□□□ -0.08
CLDN20P56880 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.58□□□□□ -0.08
CLDN20P56880 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.58□□□□□ -0.08
CLDN20P56880 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.58□□□□□ -0.08
CLDN20P56880 RN7SL828P-201ENST00000607615 303 ntBASIC14.58□□□□□ -0.08
CLDN20P56880 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN20P56880 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CLDN20P56880 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN20P56880 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CLDN20P56880 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN20P56880 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN20P56880 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CLDN20P56880 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN20P56880 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN20P56880 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN20P56880 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN20P56880 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN20P56880 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN20P56880 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
CLDN20P56880 AL035456.1-201ENST00000456064 1369 ntBASIC14.58□□□□□ -0.08
CLDN20P56880 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.58□□□□□ -0.08
CLDN20P56880 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN20P56880 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN20P56880 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN20P56880 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms