Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC025279.2-201ENST00000569730 653 ntBASIC13.72□□□□□ -0.21
HCFC1P51610 MIR3615-201ENST00000581999 87 ntBASIC13.72□□□□□ -0.21
HCFC1P51610 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.72□□□□□ -0.21
HCFC1P51610 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.72□□□□□ -0.21
HCFC1P51610 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
HCFC1P51610 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
HCFC1P51610 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.72□□□□□ -0.21
HCFC1P51610 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
HCFC1P51610 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
HCFC1P51610 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.72□□□□□ -0.21
HCFC1P51610 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
HCFC1P51610 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HCFC1P51610 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HCFC1P51610 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
HCFC1P51610 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
HCFC1P51610 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HCFC1P51610 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HCFC1P51610 MIR1202-201ENST00000408529 83 ntBASIC13.71□□□□□ -0.21
HCFC1P51610 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.71□□□□□ -0.21
HCFC1P51610 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.71□□□□□ -0.21
HCFC1P51610 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HCFC1P51610 MTX1P1-201ENST00000440904 838 ntBASIC13.71□□□□□ -0.21
HCFC1P51610 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HCFC1P51610 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
HCFC1P51610 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.71□□□□□ -0.21
HCFC1P51610 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HCFC1P51610 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.71□□□□□ -0.21
HCFC1P51610 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.71□□□□□ -0.21
HCFC1P51610 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.71□□□□□ -0.21
HCFC1P51610 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
HCFC1P51610 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HCFC1P51610 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.71□□□□□ -0.21
HCFC1P51610 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HCFC1P51610 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HCFC1P51610 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
HCFC1P51610 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HCFC1P51610 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HCFC1P51610 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.71□□□□□ -0.21
HCFC1P51610 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HCFC1P51610 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HCFC1P51610 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HCFC1P51610 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HCFC1P51610 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HCFC1P51610 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
HCFC1P51610 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
HCFC1P51610 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
HCFC1P51610 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HCFC1P51610 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
HCFC1P51610 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HCFC1P51610 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
HCFC1P51610 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HCFC1P51610 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.71□□□□□ -0.22
HCFC1P51610 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HCFC1P51610 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
HCFC1P51610 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HCFC1P51610 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.71□□□□□ -0.22
HCFC1P51610 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HCFC1P51610 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.71□□□□□ -0.22
HCFC1P51610 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.22
HCFC1P51610 AC104306.2-201ENST00000451877 341 ntBASIC13.71□□□□□ -0.22
HCFC1P51610 IGHJ2P-201ENST00000454480 60 ntBASIC13.71□□□□□ -0.22
HCFC1P51610 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.71□□□□□ -0.22
HCFC1P51610 AP001063.1-201ENST00000568332 529 ntBASIC13.71□□□□□ -0.22
HCFC1P51610 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HCFC1P51610 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.71□□□□□ -0.22
HCFC1P51610 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.71□□□□□ -0.22
HCFC1P51610 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.71□□□□□ -0.22
HCFC1P51610 AC084346.2-201ENST00000607097 949 ntBASIC13.71□□□□□ -0.22
HCFC1P51610 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.71□□□□□ -0.22
HCFC1P51610 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
HCFC1P51610 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HCFC1P51610 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HCFC1P51610 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HCFC1P51610 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
HCFC1P51610 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
HCFC1P51610 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
HCFC1P51610 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HCFC1P51610 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HCFC1P51610 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCFC1P51610 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.7□□□□□ -0.22
HCFC1P51610 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HCFC1P51610 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCFC1P51610 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.7□□□□□ -0.22
HCFC1P51610 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.7□□□□□ -0.22
HCFC1P51610 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.7□□□□□ -0.22
HCFC1P51610 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms