Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A6P48664 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A6P48664 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC1A6P48664 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SLC1A6P48664 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A6P48664 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC1A6P48664 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SLC1A6P48664 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A6P48664 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC1A6P48664 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A6P48664 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SLC1A6P48664 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A6P48664 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC1A6P48664 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SLC1A6P48664 REXO1L1P-202ENST00000608646 1974 ntBASIC15.64■□□□□ 0.09
SLC1A6P48664 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SLC1A6P48664 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SLC1A6P48664 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A6P48664 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A6P48664 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A6P48664 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A6P48664 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC1A6P48664 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
SLC1A6P48664 CRYGEP-201ENST00000412192 528 ntBASIC15.64■□□□□ 0.09
SLC1A6P48664 KRT18P67-201ENST00000432816 1264 ntBASIC15.64■□□□□ 0.09
SLC1A6P48664 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.64■□□□□ 0.09
SLC1A6P48664 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC1A6P48664 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC1A6P48664 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A6P48664 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SLC1A6P48664 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC1A6P48664 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC1A6P48664 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SLC1A6P48664 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A6P48664 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SLC1A6P48664 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC1A6P48664 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A6P48664 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A6P48664 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC1A6P48664 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A6P48664 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A6P48664 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A6P48664 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC1A6P48664 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SLC1A6P48664 AC023024.2-201ENST00000623561 1993 ntBASIC15.64■□□□□ 0.09
SLC1A6P48664 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A6P48664 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A6P48664 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SLC1A6P48664 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A6P48664 FGD5P1-202ENST00000614866 2498 ntBASIC15.63■□□□□ 0.09
SLC1A6P48664 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
SLC1A6P48664 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A6P48664 AC007191.1-201ENST00000623179 2995 ntBASIC15.63■□□□□ 0.09
SLC1A6P48664 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A6P48664 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A6P48664 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A6P48664 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A6P48664 MIR600HG-201ENST00000449175 5984 ntBASIC15.63■□□□□ 0.09
SLC1A6P48664 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A6P48664 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A6P48664 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A6P48664 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A6P48664 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A6P48664 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC1A6P48664 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A6P48664 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A6P48664 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.63■□□□□ 0.09
SLC1A6P48664 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.63■□□□□ 0.09
SLC1A6P48664 RHOQP3-201ENST00000437982 621 ntBASIC15.63■□□□□ 0.09
SLC1A6P48664 AC140658.5-201ENST00000438532 169 ntBASIC15.63■□□□□ 0.09
SLC1A6P48664 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC1A6P48664 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.63■□□□□ 0.09
SLC1A6P48664 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC1A6P48664 AC096734.2-201ENST00000562054 433 ntBASIC15.63■□□□□ 0.09
SLC1A6P48664 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC1A6P48664 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.63■□□□□ 0.09
SLC1A6P48664 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.63■□□□□ 0.09
SLC1A6P48664 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC1A6P48664 AC148477.8-201ENST00000624298 468 ntBASIC15.63■□□□□ 0.09
SLC1A6P48664 FAM215A-202ENST00000632077 792 ntBASIC15.63■□□□□ 0.09
SLC1A6P48664 AC010507.1-201ENST00000633895 436 ntBASIC15.63■□□□□ 0.09
SLC1A6P48664 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC1A6P48664 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC1A6P48664 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A6P48664 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A6P48664 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A6P48664 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A6P48664 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A6P48664 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC1A6P48664 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC1A6P48664 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A6P48664 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A6P48664 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
SLC1A6P48664 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
SLC1A6P48664 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A6P48664 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A6P48664 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SLC1A6P48664 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A6P48664 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.62■□□□□ 0.09
SLC1A6P48664 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms