Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC1A1P43005 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC1A1P43005 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
SLC1A1P43005 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
SLC1A1P43005 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A1P43005 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A1P43005 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A1P43005 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A1P43005 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC1A1P43005 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC1A1P43005 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A1P43005 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC1A1P43005 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A1P43005 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A1P43005 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A1P43005 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A1P43005 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SLC1A1P43005 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC1A1P43005 ALG1L5P-201ENST00000482043 771 ntBASIC16.6■□□□□ 0.25
SLC1A1P43005 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC1A1P43005 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.6■□□□□ 0.25
SLC1A1P43005 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC1A1P43005 AC022145.2-201ENST00000598203 171 ntBASIC16.6■□□□□ 0.25
SLC1A1P43005 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.6■□□□□ 0.25
SLC1A1P43005 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A1P43005 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SLC1A1P43005 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC1A1P43005 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A1P43005 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC1A1P43005 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A1P43005 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A1P43005 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A1P43005 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A1P43005 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A1P43005 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A1P43005 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A1P43005 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC1A1P43005 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC1A1P43005 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC1A1P43005 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SLC1A1P43005 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC1A1P43005 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SLC1A1P43005 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC1A1P43005 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SLC1A1P43005 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC1A1P43005 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC1A1P43005 AL022342.1-201ENST00000400363 863 ntBASIC16.59■□□□□ 0.25
SLC1A1P43005 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC1A1P43005 CEND1P1-201ENST00000451006 455 ntBASIC16.59■□□□□ 0.25
SLC1A1P43005 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC1A1P43005 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.59■□□□□ 0.25
SLC1A1P43005 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC1A1P43005 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 ALG1L8P-201ENST00000533887 760 ntBASIC16.59■□□□□ 0.25
SLC1A1P43005 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC1A1P43005 AC005829.1-201ENST00000570002 483 ntBASIC16.59■□□□□ 0.25
SLC1A1P43005 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC1A1P43005 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC1A1P43005 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC1A1P43005 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC1A1P43005 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
SLC1A1P43005 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC1A1P43005 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SLC1A1P43005 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SLC1A1P43005 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 AC099063.4-201ENST00000641099 1602 ntBASIC16.59■□□□□ 0.25
SLC1A1P43005 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC1A1P43005 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A1P43005 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC1A1P43005 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SLC1A1P43005 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
SLC1A1P43005 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.25
SLC1A1P43005 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC1A1P43005 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.58■□□□□ 0.25
SLC1A1P43005 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC1A1P43005 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SLC1A1P43005 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC1A1P43005 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms