Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.13□□□□□ -0.31
SNCAP37840 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.13□□□□□ -0.31
SNCAP37840 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.13□□□□□ -0.31
SNCAP37840 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCAP37840 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCAP37840 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.13□□□□□ -0.31
SNCAP37840 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCAP37840 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SNCAP37840 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.13□□□□□ -0.31
SNCAP37840 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCAP37840 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.13□□□□□ -0.31
SNCAP37840 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SNCAP37840 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCAP37840 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SNCAP37840 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SNCAP37840 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.13□□□□□ -0.31
SNCAP37840 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.13□□□□□ -0.31
SNCAP37840 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCAP37840 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SNCAP37840 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.13□□□□□ -0.31
SNCAP37840 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.13□□□□□ -0.31
SNCAP37840 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.13□□□□□ -0.31
SNCAP37840 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.13□□□□□ -0.31
SNCAP37840 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.13□□□□□ -0.31
SNCAP37840 AC107918.2-201ENST00000530817 355 ntBASIC13.13□□□□□ -0.31
SNCAP37840 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.13□□□□□ -0.31
SNCAP37840 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.13□□□□□ -0.31
SNCAP37840 AC010654.1-201ENST00000615722 808 ntBASIC13.13□□□□□ -0.31
SNCAP37840 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCAP37840 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.13□□□□□ -0.31
SNCAP37840 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.13□□□□□ -0.31
SNCAP37840 PGM5P2-202ENST00000637225 1043 ntBASIC13.13□□□□□ -0.31
SNCAP37840 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCAP37840 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.13□□□□□ -0.31
SNCAP37840 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SNCAP37840 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SNCAP37840 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCAP37840 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
SNCAP37840 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.13□□□□□ -0.31
SNCAP37840 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SNCAP37840 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SNCAP37840 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.13□□□□□ -0.31
SNCAP37840 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.13□□□□□ -0.31
SNCAP37840 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SNCAP37840 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCAP37840 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCAP37840 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SNCAP37840 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.13□□□□□ -0.31
SNCAP37840 AC012569.1-201ENST00000591191 1524 ntBASIC13.13□□□□□ -0.31
SNCAP37840 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
SNCAP37840 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCAP37840 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCAP37840 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.13□□□□□ -0.31
SNCAP37840 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.12□□□□□ -0.31
SNCAP37840 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
SNCAP37840 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.12□□□□□ -0.31
SNCAP37840 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SNCAP37840 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SNCAP37840 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.12□□□□□ -0.31
SNCAP37840 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
SNCAP37840 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.12□□□□□ -0.31
SNCAP37840 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.12□□□□□ -0.31
SNCAP37840 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SNCAP37840 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SNCAP37840 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 MIR648-201ENST00000385046 94 ntBASIC13.12□□□□□ -0.31
SNCAP37840 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.12□□□□□ -0.31
SNCAP37840 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.12□□□□□ -0.31
SNCAP37840 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.12□□□□□ -0.31
SNCAP37840 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 AC092919.2-201ENST00000623631 1645 ntBASIC13.12□□□□□ -0.31
SNCAP37840 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.12□□□□□ -0.31
SNCAP37840 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SNCAP37840 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNCAP37840 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.12□□□□□ -0.31
SNCAP37840 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.12□□□□□ -0.31
SNCAP37840 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
SNCAP37840 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms