Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 AL691432.1-201ENST00000596308 1422 ntBASIC14.78□□□□□ -0.04
TNFRSF1BP20333 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 AC074386.1-202ENST00000463561 864 ntBASIC14.78□□□□□ -0.04
TNFRSF1BP20333 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 PDPK2P-202ENST00000562415 1191 ntBASIC14.78□□□□□ -0.04
TNFRSF1BP20333 AC145285.3-201ENST00000564603 959 ntBASIC14.78□□□□□ -0.04
TNFRSF1BP20333 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 AC092865.6-201ENST00000642101 219 ntBASIC14.78□□□□□ -0.04
TNFRSF1BP20333 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 AC127383.1-201ENST00000444697 1800 ntBASIC14.78□□□□□ -0.04
TNFRSF1BP20333 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.77□□□□□ -0.04
TNFRSF1BP20333 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 AL662844.1-201ENST00000546340 181 ntBASIC14.77□□□□□ -0.05
TNFRSF1BP20333 AC243562.2-201ENST00000561247 970 ntBASIC14.77□□□□□ -0.05
TNFRSF1BP20333 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 SPTSSB-204ENST00000617024 1292 ntBASIC14.77□□□□□ -0.05
TNFRSF1BP20333 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 AL136982.4-201ENST00000437689 1740 ntBASIC14.77□□□□□ -0.05
TNFRSF1BP20333 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
TNFRSF1BP20333 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms