Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AJ011932.1-201ENST00000621707 465 ntBASIC15.87■□□□□ 0.13
XRCC1P18887 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.87■□□□□ 0.13
XRCC1P18887 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
XRCC1P18887 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC1P18887 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC1P18887 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
XRCC1P18887 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
XRCC1P18887 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC1P18887 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC1P18887 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC1P18887 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.87■□□□□ 0.13
XRCC1P18887 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC1P18887 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC1P18887 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC1P18887 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC1P18887 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC1P18887 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC1P18887 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC1P18887 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC1P18887 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
XRCC1P18887 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
XRCC1P18887 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC1P18887 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC1P18887 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.86■□□□□ 0.13
XRCC1P18887 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
XRCC1P18887 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
XRCC1P18887 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
XRCC1P18887 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC1P18887 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.86■□□□□ 0.13
XRCC1P18887 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.86■□□□□ 0.13
XRCC1P18887 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.86■□□□□ 0.13
XRCC1P18887 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC1P18887 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.86■□□□□ 0.13
XRCC1P18887 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
XRCC1P18887 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC1P18887 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.86■□□□□ 0.13
XRCC1P18887 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC1P18887 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC1P18887 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.86■□□□□ 0.13
XRCC1P18887 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC1P18887 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC1P18887 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
XRCC1P18887 INGX-202ENST00000489074 768 ntBASIC15.86■□□□□ 0.13
XRCC1P18887 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.86■□□□□ 0.13
XRCC1P18887 AC027369.6-201ENST00000525520 931 ntBASIC15.86■□□□□ 0.13
XRCC1P18887 AC105021.1-202ENST00000570572 669 ntBASIC15.86■□□□□ 0.13
XRCC1P18887 MIR3197-201ENST00000582241 73 ntBASIC15.86■□□□□ 0.13
XRCC1P18887 AC073592.8-201ENST00000624126 511 ntBASIC15.86■□□□□ 0.13
XRCC1P18887 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC1P18887 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
XRCC1P18887 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.86■□□□□ 0.13
XRCC1P18887 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.86■□□□□ 0.13
XRCC1P18887 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC1P18887 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC1P18887 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.86■□□□□ 0.13
XRCC1P18887 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC1P18887 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
XRCC1P18887 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
XRCC1P18887 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
XRCC1P18887 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
XRCC1P18887 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
XRCC1P18887 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
XRCC1P18887 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
XRCC1P18887 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.85■□□□□ 0.13
XRCC1P18887 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.85■□□□□ 0.13
XRCC1P18887 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.85■□□□□ 0.13
XRCC1P18887 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
XRCC1P18887 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
XRCC1P18887 AC023157.3-201ENST00000619086 2088 ntBASIC15.85■□□□□ 0.13
XRCC1P18887 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
XRCC1P18887 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.85■□□□□ 0.13
XRCC1P18887 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
XRCC1P18887 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
XRCC1P18887 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
XRCC1P18887 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
XRCC1P18887 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
XRCC1P18887 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
XRCC1P18887 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
XRCC1P18887 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
XRCC1P18887 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
XRCC1P18887 HLA-V-204ENST00000476601 1289 ntBASIC15.85■□□□□ 0.13
XRCC1P18887 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.85■□□□□ 0.13
XRCC1P18887 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
XRCC1P18887 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.85■□□□□ 0.13
XRCC1P18887 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
XRCC1P18887 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.85■□□□□ 0.13
XRCC1P18887 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.85■□□□□ 0.13
XRCC1P18887 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.85■□□□□ 0.13
XRCC1P18887 AL365330.1-201ENST00000607459 531 ntBASIC15.85■□□□□ 0.13
XRCC1P18887 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.85■□□□□ 0.13
XRCC1P18887 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
XRCC1P18887 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
XRCC1P18887 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.85■□□□□ 0.13
XRCC1P18887 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
XRCC1P18887 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
XRCC1P18887 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
XRCC1P18887 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
XRCC1P18887 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.85■□□□□ 0.13
XRCC1P18887 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
XRCC1P18887 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms