Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.98□□□□□ -0.17
ATF1P18846 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ATF1P18846 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 CICP4-201ENST00000447359 2812 ntBASIC13.98□□□□□ -0.17
ATF1P18846 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.98□□□□□ -0.17
ATF1P18846 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.98□□□□□ -0.17
ATF1P18846 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.97□□□□□ -0.17
ATF1P18846 KRT8P44-201ENST00000441609 1350 ntBASIC13.97□□□□□ -0.17
ATF1P18846 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.97□□□□□ -0.17
ATF1P18846 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.97□□□□□ -0.17
ATF1P18846 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ATF1P18846 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.97□□□□□ -0.17
ATF1P18846 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ATF1P18846 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ATF1P18846 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.97□□□□□ -0.17
ATF1P18846 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ATF1P18846 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 AC140658.5-201ENST00000438532 169 ntBASIC13.97□□□□□ -0.17
ATF1P18846 AC079776.4-201ENST00000511039 504 ntBASIC13.97□□□□□ -0.17
ATF1P18846 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.97□□□□□ -0.17
ATF1P18846 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ATF1P18846 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 AL662844.1-201ENST00000546340 181 ntBASIC13.97□□□□□ -0.17
ATF1P18846 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.97□□□□□ -0.17
ATF1P18846 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.97□□□□□ -0.17
ATF1P18846 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.97□□□□□ -0.17
ATF1P18846 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.97□□□□□ -0.17
ATF1P18846 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.97□□□□□ -0.17
ATF1P18846 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.97□□□□□ -0.17
ATF1P18846 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.97□□□□□ -0.17
ATF1P18846 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ATF1P18846 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.97□□□□□ -0.17
ATF1P18846 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ATF1P18846 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.97□□□□□ -0.17
ATF1P18846 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
ATF1P18846 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ATF1P18846 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATF1P18846 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
ATF1P18846 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATF1P18846 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.96□□□□□ -0.17
ATF1P18846 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATF1P18846 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
ATF1P18846 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
ATF1P18846 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.96□□□□□ -0.17
ATF1P18846 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATF1P18846 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
ATF1P18846 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ATF1P18846 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATF1P18846 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATF1P18846 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATF1P18846 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATF1P18846 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.96□□□□□ -0.17
ATF1P18846 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.96□□□□□ -0.17
ATF1P18846 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ATF1P18846 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.96□□□□□ -0.17
ATF1P18846 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATF1P18846 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ATF1P18846 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
ATF1P18846 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ATF1P18846 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
ATF1P18846 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATF1P18846 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.96□□□□□ -0.17
ATF1P18846 Z83851.2-201ENST00000609564 659 ntBASIC13.96□□□□□ -0.17
ATF1P18846 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.96□□□□□ -0.17
ATF1P18846 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATF1P18846 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms