Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.76■□□□□ 0.27
PTPN1P18031 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.76■□□□□ 0.27
PTPN1P18031 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN1P18031 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PTPN1P18031 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN1P18031 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN1P18031 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.76■□□□□ 0.27
PTPN1P18031 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN1P18031 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN1P18031 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN1P18031 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN1P18031 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN1P18031 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN1P18031 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PTPN1P18031 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PTPN1P18031 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN1P18031 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN1P18031 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN1P18031 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN1P18031 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
PTPN1P18031 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN1P18031 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PTPN1P18031 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN1P18031 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN1P18031 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN1P18031 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN1P18031 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN1P18031 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PTPN1P18031 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN1P18031 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.75■□□□□ 0.27
PTPN1P18031 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN1P18031 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN1P18031 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.75■□□□□ 0.27
PTPN1P18031 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PTPN1P18031 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.75■□□□□ 0.27
PTPN1P18031 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.75■□□□□ 0.27
PTPN1P18031 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PTPN1P18031 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.75■□□□□ 0.27
PTPN1P18031 RARRES2P5-201ENST00000564013 466 ntBASIC16.75■□□□□ 0.27
PTPN1P18031 TP53TG3HP-202ENST00000569755 579 ntBASIC16.75■□□□□ 0.27
PTPN1P18031 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
PTPN1P18031 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.75■□□□□ 0.27
PTPN1P18031 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN1P18031 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN1P18031 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.75■□□□□ 0.27
PTPN1P18031 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN1P18031 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN1P18031 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN1P18031 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN1P18031 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN1P18031 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN1P18031 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN1P18031 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN1P18031 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
PTPN1P18031 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PTPN1P18031 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN1P18031 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN1P18031 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN1P18031 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN1P18031 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN1P18031 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN1P18031 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN1P18031 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN1P18031 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN1P18031 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PTPN1P18031 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PTPN1P18031 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PTPN1P18031 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN1P18031 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN1P18031 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN1P18031 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PTPN1P18031 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN1P18031 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN1P18031 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN1P18031 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN1P18031 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN1P18031 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN1P18031 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN1P18031 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN1P18031 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PTPN1P18031 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN1P18031 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN1P18031 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN1P18031 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN1P18031 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN1P18031 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN1P18031 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN1P18031 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN1P18031 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN1P18031 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN1P18031 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN1P18031 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN1P18031 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN1P18031 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN1P18031 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN1P18031 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN1P18031 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN1P18031 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PTPN1P18031 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN1P18031 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms