Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
THRAP10827 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
THRAP10827 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
THRAP10827 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
THRAP10827 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
THRAP10827 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
THRAP10827 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
THRAP10827 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
THRAP10827 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.99■□□□□ 0.15
THRAP10827 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.99■□□□□ 0.15
THRAP10827 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
THRAP10827 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.99■□□□□ 0.15
THRAP10827 INGX-202ENST00000489074 768 ntBASIC15.99■□□□□ 0.15
THRAP10827 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.99■□□□□ 0.15
THRAP10827 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.99■□□□□ 0.15
THRAP10827 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.99■□□□□ 0.15
THRAP10827 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
THRAP10827 GPAA1P2-202ENST00000606848 1787 ntBASIC15.99■□□□□ 0.15
THRAP10827 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
THRAP10827 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
THRAP10827 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.99■□□□□ 0.15
THRAP10827 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.99■□□□□ 0.15
THRAP10827 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
THRAP10827 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
THRAP10827 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
THRAP10827 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.99■□□□□ 0.15
THRAP10827 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
THRAP10827 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.99■□□□□ 0.15
THRAP10827 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.99■□□□□ 0.15
THRAP10827 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.99■□□□□ 0.15
THRAP10827 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
THRAP10827 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
THRAP10827 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.98■□□□□ 0.15
THRAP10827 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
THRAP10827 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
THRAP10827 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.98■□□□□ 0.15
THRAP10827 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
THRAP10827 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
THRAP10827 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
THRAP10827 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
THRAP10827 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.98■□□□□ 0.15
THRAP10827 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
THRAP10827 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
THRAP10827 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
THRAP10827 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
THRAP10827 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
THRAP10827 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
THRAP10827 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
THRAP10827 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.98■□□□□ 0.15
THRAP10827 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
THRAP10827 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
THRAP10827 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.98■□□□□ 0.15
THRAP10827 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
THRAP10827 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.98■□□□□ 0.15
THRAP10827 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.98■□□□□ 0.15
THRAP10827 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.98■□□□□ 0.15
THRAP10827 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
THRAP10827 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.98■□□□□ 0.15
THRAP10827 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.98■□□□□ 0.15
THRAP10827 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
THRAP10827 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
THRAP10827 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.98■□□□□ 0.15
THRAP10827 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.98■□□□□ 0.15
THRAP10827 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
THRAP10827 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.98■□□□□ 0.15
THRAP10827 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
THRAP10827 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.98■□□□□ 0.15
THRAP10827 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
THRAP10827 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
THRAP10827 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
THRAP10827 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
THRAP10827 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
THRAP10827 FO538757.1-201ENST00000623083 1397 ntBASIC15.98■□□□□ 0.15
THRAP10827 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
THRAP10827 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
THRAP10827 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
THRAP10827 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
THRAP10827 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.98■□□□□ 0.15
THRAP10827 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
THRAP10827 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
THRAP10827 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
THRAP10827 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.97■□□□□ 0.15
THRAP10827 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
THRAP10827 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
THRAP10827 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
THRAP10827 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
THRAP10827 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
THRAP10827 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.97■□□□□ 0.15
THRAP10827 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.97■□□□□ 0.15
THRAP10827 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.97■□□□□ 0.15
THRAP10827 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
THRAP10827 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
THRAP10827 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
THRAP10827 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
THRAP10827 TREML5P-201ENST00000421694 576 ntBASIC15.97■□□□□ 0.15
THRAP10827 AC142381.1-201ENST00000426099 345 ntBASIC15.97■□□□□ 0.15
THRAP10827 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.97■□□□□ 0.15
THRAP10827 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.97■□□□□ 0.15
THRAP10827 KRT18P34-201ENST00000488218 1270 ntBASIC15.97■□□□□ 0.15
THRAP10827 AC105233.2-201ENST00000523697 349 ntBASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms