Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CCL3P10147 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3P10147 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3P10147 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3P10147 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CCL3P10147 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3P10147 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3P10147 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL3P10147 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.39□□□□□ -0.11
CCL3P10147 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3P10147 CU639417.3-201ENST00000624240 1404 ntBASIC14.39□□□□□ -0.11
CCL3P10147 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CCL3P10147 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3P10147 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3P10147 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3P10147 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3P10147 AC063926.2-201ENST00000623766 1308 ntBASIC14.39□□□□□ -0.11
CCL3P10147 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CCL3P10147 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.39□□□□□ -0.11
CCL3P10147 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3P10147 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3P10147 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL3P10147 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3P10147 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3P10147 PCDHA1-201ENST00000378133 2726 ntBASIC14.38□□□□□ -0.11
CCL3P10147 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CCL3P10147 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL3P10147 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3P10147 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3P10147 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
CCL3P10147 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3P10147 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3P10147 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.38□□□□□ -0.11
CCL3P10147 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3P10147 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3P10147 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3P10147 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CCL3P10147 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCL3P10147 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL3P10147 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3P10147 RN7SL752P-201ENST00000463779 287 ntBASIC14.38□□□□□ -0.11
CCL3P10147 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.38□□□□□ -0.11
CCL3P10147 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3P10147 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.38□□□□□ -0.11
CCL3P10147 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.38□□□□□ -0.11
CCL3P10147 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.38□□□□□ -0.11
CCL3P10147 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.38□□□□□ -0.11
CCL3P10147 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3P10147 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.38□□□□□ -0.11
CCL3P10147 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3P10147 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCL3P10147 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3P10147 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCL3P10147 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3P10147 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3P10147 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3P10147 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3P10147 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CCL3P10147 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3P10147 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
CCL3P10147 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3P10147 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3P10147 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3P10147 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
CCL3P10147 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3P10147 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3P10147 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3P10147 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3P10147 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3P10147 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3P10147 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3P10147 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3P10147 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.37□□□□□ -0.11
CCL3P10147 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3P10147 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3P10147 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3P10147 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CCL3P10147 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3P10147 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3P10147 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3P10147 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CCL3P10147 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3P10147 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3P10147 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.37□□□□□ -0.11
CCL3P10147 INE1-201ENST00000456273 945 ntBASIC14.37□□□□□ -0.11
CCL3P10147 FAM86LP-201ENST00000478302 853 ntBASIC14.37□□□□□ -0.11
CCL3P10147 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CCL3P10147 CR383656.12-201ENST00000549567 513 ntBASIC14.37□□□□□ -0.11
CCL3P10147 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.37□□□□□ -0.11
CCL3P10147 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3P10147 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
CCL3P10147 TMEM261P1-201ENST00000604899 340 ntBASIC14.37□□□□□ -0.11
CCL3P10147 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CCL3P10147 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCL3P10147 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3P10147 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
CCL3P10147 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3P10147 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3P10147 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3P10147 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms