Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.62□□□□□ -0.07
THBS1P07996 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.62□□□□□ -0.07
THBS1P07996 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.62□□□□□ -0.07
THBS1P07996 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.62□□□□□ -0.07
THBS1P07996 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.62□□□□□ -0.07
THBS1P07996 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.62□□□□□ -0.07
THBS1P07996 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.62□□□□□ -0.07
THBS1P07996 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
THBS1P07996 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.62□□□□□ -0.07
THBS1P07996 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
THBS1P07996 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.62□□□□□ -0.07
THBS1P07996 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
THBS1P07996 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
THBS1P07996 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
THBS1P07996 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
THBS1P07996 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
THBS1P07996 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
THBS1P07996 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
THBS1P07996 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
THBS1P07996 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
THBS1P07996 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.61□□□□□ -0.07
THBS1P07996 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
THBS1P07996 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.61□□□□□ -0.07
THBS1P07996 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.61□□□□□ -0.07
THBS1P07996 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
THBS1P07996 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
THBS1P07996 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
THBS1P07996 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
THBS1P07996 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.61□□□□□ -0.07
THBS1P07996 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
THBS1P07996 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
THBS1P07996 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
THBS1P07996 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.61□□□□□ -0.07
THBS1P07996 FO393414.2-201ENST00000405153 598 ntBASIC14.61□□□□□ -0.07
THBS1P07996 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.61□□□□□ -0.07
THBS1P07996 AC090142.2-201ENST00000483263 416 ntBASIC14.61□□□□□ -0.07
THBS1P07996 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
THBS1P07996 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.61□□□□□ -0.07
THBS1P07996 BANF1P1-201ENST00000553684 263 ntBASIC14.61□□□□□ -0.07
THBS1P07996 AC093520.2-201ENST00000561830 333 ntBASIC14.61□□□□□ -0.07
THBS1P07996 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.61□□□□□ -0.07
THBS1P07996 AC004835.2-201ENST00000603762 682 ntBASIC14.61□□□□□ -0.07
THBS1P07996 AC027612.4-201ENST00000605371 583 ntBASIC14.61□□□□□ -0.07
THBS1P07996 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.61□□□□□ -0.07
THBS1P07996 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.61□□□□□ -0.07
THBS1P07996 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
THBS1P07996 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
THBS1P07996 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
THBS1P07996 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
THBS1P07996 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
THBS1P07996 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
THBS1P07996 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
THBS1P07996 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
THBS1P07996 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
THBS1P07996 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
THBS1P07996 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.61□□□□□ -0.07
THBS1P07996 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.61□□□□□ -0.07
THBS1P07996 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.61□□□□□ -0.07
THBS1P07996 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
THBS1P07996 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.61□□□□□ -0.07
THBS1P07996 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
THBS1P07996 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
THBS1P07996 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
THBS1P07996 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.61□□□□□ -0.07
THBS1P07996 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.61□□□□□ -0.07
THBS1P07996 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
THBS1P07996 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
THBS1P07996 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
THBS1P07996 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
THBS1P07996 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
THBS1P07996 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.61□□□□□ -0.07
THBS1P07996 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.61□□□□□ -0.07
THBS1P07996 AL035456.1-201ENST00000456064 1369 ntBASIC14.6□□□□□ -0.07
THBS1P07996 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
THBS1P07996 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.6□□□□□ -0.07
THBS1P07996 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
THBS1P07996 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
THBS1P07996 AZGP1P1-201ENST00000411909 902 ntBASIC14.6□□□□□ -0.07
THBS1P07996 SPDYE17-201ENST00000412399 783 ntBASIC14.6□□□□□ -0.07
THBS1P07996 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.6□□□□□ -0.07
THBS1P07996 GPS2P2-201ENST00000430745 888 ntBASIC14.6□□□□□ -0.07
THBS1P07996 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.6□□□□□ -0.07
THBS1P07996 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.6□□□□□ -0.07
THBS1P07996 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.6□□□□□ -0.07
THBS1P07996 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.6□□□□□ -0.07
THBS1P07996 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms