Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DRAP01903 AC009090.5-201ENST00000624886 2285 ntBASIC17.03■□□□□ 0.32
HLA-DRAP01903 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DRAP01903 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DRAP01903 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DRAP01903 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.02■□□□□ 0.32
HLA-DRAP01903 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DRAP01903 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DRAP01903 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DRAP01903 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
HLA-DRAP01903 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HLA-DRAP01903 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DRAP01903 AC105250.1-201ENST00000509378 2057 ntBASIC17.02■□□□□ 0.32
HLA-DRAP01903 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DRAP01903 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.02■□□□□ 0.32
HLA-DRAP01903 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DRAP01903 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DRAP01903 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DRAP01903 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DRAP01903 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HLA-DRAP01903 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DRAP01903 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.02■□□□□ 0.32
HLA-DRAP01903 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DRAP01903 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DRAP01903 KRT18P64-201ENST00000434946 1219 ntBASIC17.02■□□□□ 0.32
HLA-DRAP01903 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.02■□□□□ 0.32
HLA-DRAP01903 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DRAP01903 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DRAP01903 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DRAP01903 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HLA-DRAP01903 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.02■□□□□ 0.32
HLA-DRAP01903 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DRAP01903 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
HLA-DRAP01903 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DRAP01903 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DRAP01903 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HLA-DRAP01903 AC127383.1-201ENST00000444697 1800 ntBASIC17.02■□□□□ 0.31
HLA-DRAP01903 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
HLA-DRAP01903 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DRAP01903 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.02■□□□□ 0.31
HLA-DRAP01903 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.02■□□□□ 0.31
HLA-DRAP01903 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DRAP01903 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DRAP01903 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DRAP01903 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DRAP01903 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 AC020658.6-201ENST00000623564 1870 ntBASIC17.01■□□□□ 0.31
HLA-DRAP01903 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DRAP01903 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DRAP01903 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DRAP01903 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DRAP01903 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DRAP01903 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DRAP01903 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DRAP01903 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DRAP01903 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 AL512638.1-201ENST00000457493 794 ntBASIC17.01■□□□□ 0.31
HLA-DRAP01903 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 AC008738.7-201ENST00000609744 511 ntBASIC17.01■□□□□ 0.31
HLA-DRAP01903 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DRAP01903 AF228730.6-201ENST00000641497 218 ntBASIC17.01■□□□□ 0.31
HLA-DRAP01903 AC084121.3-201ENST00000641716 218 ntBASIC17.01■□□□□ 0.31
HLA-DRAP01903 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DRAP01903 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DRAP01903 AC022144.1-201ENST00000602255 1580 ntBASIC17.01■□□□□ 0.31
HLA-DRAP01903 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DRAP01903 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DRAP01903 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DRAP01903 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DRAP01903 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DRAP01903 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DRAP01903 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DRAP01903 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HLA-DRAP01903 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DRAP01903 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
HLA-DRAP01903 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DRAP01903 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DRAP01903 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms