Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 KRT8P44-201ENST00000441609 1350 ntBASIC15.95■□□□□ 0.14
RFPL1O75677 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RFPL1O75677 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFPL1O75677 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RFPL1O75677 BNIP3P1-202ENST00000550043 1585 ntBASIC15.95■□□□□ 0.14
RFPL1O75677 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
RFPL1O75677 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFPL1O75677 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFPL1O75677 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RFPL1O75677 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
RFPL1O75677 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 AL691432.1-201ENST00000596308 1422 ntBASIC15.94■□□□□ 0.14
RFPL1O75677 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.94■□□□□ 0.14
RFPL1O75677 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.94■□□□□ 0.14
RFPL1O75677 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.94■□□□□ 0.14
RFPL1O75677 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.94■□□□□ 0.14
RFPL1O75677 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RFPL1O75677 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
RFPL1O75677 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.94■□□□□ 0.14
RFPL1O75677 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.94■□□□□ 0.14
RFPL1O75677 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.94■□□□□ 0.14
RFPL1O75677 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.94■□□□□ 0.14
RFPL1O75677 BCRP1-201ENST00000444246 691 ntBASIC15.94■□□□□ 0.14
RFPL1O75677 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RFPL1O75677 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.94■□□□□ 0.14
RFPL1O75677 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RFPL1O75677 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.94■□□□□ 0.14
RFPL1O75677 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.94■□□□□ 0.14
RFPL1O75677 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 HLA-J-203ENST00000494367 1087 ntBASIC15.94■□□□□ 0.14
RFPL1O75677 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.94■□□□□ 0.14
RFPL1O75677 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.94■□□□□ 0.14
RFPL1O75677 AC022145.2-201ENST00000598203 171 ntBASIC15.94■□□□□ 0.14
RFPL1O75677 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.94■□□□□ 0.14
RFPL1O75677 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
RFPL1O75677 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.94■□□□□ 0.14
RFPL1O75677 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
RFPL1O75677 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.94■□□□□ 0.14
RFPL1O75677 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.94■□□□□ 0.14
RFPL1O75677 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.94■□□□□ 0.14
RFPL1O75677 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.94■□□□□ 0.14
RFPL1O75677 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RFPL1O75677 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.94■□□□□ 0.14
RFPL1O75677 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RFPL1O75677 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.93■□□□□ 0.14
RFPL1O75677 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFPL1O75677 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFPL1O75677 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.93■□□□□ 0.14
RFPL1O75677 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.93■□□□□ 0.14
RFPL1O75677 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.93■□□□□ 0.14
RFPL1O75677 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFPL1O75677 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFPL1O75677 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFPL1O75677 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.93■□□□□ 0.14
RFPL1O75677 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.93■□□□□ 0.14
RFPL1O75677 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.93■□□□□ 0.14
RFPL1O75677 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.93■□□□□ 0.14
RFPL1O75677 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.93■□□□□ 0.14
RFPL1O75677 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
RFPL1O75677 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.93■□□□□ 0.14
RFPL1O75677 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFPL1O75677 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.93■□□□□ 0.14
RFPL1O75677 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFPL1O75677 FAM86GP-201ENST00000448322 971 ntBASIC15.93■□□□□ 0.14
RFPL1O75677 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.93■□□□□ 0.14
RFPL1O75677 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFPL1O75677 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFPL1O75677 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.93■□□□□ 0.14
RFPL1O75677 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.93■□□□□ 0.14
RFPL1O75677 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
RFPL1O75677 AC061975.2-201ENST00000581722 295 ntBASIC15.93■□□□□ 0.14
RFPL1O75677 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFPL1O75677 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFPL1O75677 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RFPL1O75677 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFPL1O75677 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFPL1O75677 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFPL1O75677 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFPL1O75677 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms