Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CHMP2AO43633 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.83■□□□□ 0.44
CHMP2AO43633 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CHMP2AO43633 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CHMP2AO43633 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP2AO43633 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.83■□□□□ 0.44
CHMP2AO43633 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.83■□□□□ 0.44
CHMP2AO43633 KRT18P64-201ENST00000434946 1219 ntBASIC17.83■□□□□ 0.44
CHMP2AO43633 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.83■□□□□ 0.44
CHMP2AO43633 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.83■□□□□ 0.44
CHMP2AO43633 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.83■□□□□ 0.44
CHMP2AO43633 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.83■□□□□ 0.44
CHMP2AO43633 TIMM17BP1-201ENST00000545713 516 ntBASIC17.83■□□□□ 0.44
CHMP2AO43633 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.83■□□□□ 0.44
CHMP2AO43633 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.83■□□□□ 0.44
CHMP2AO43633 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.83■□□□□ 0.44
CHMP2AO43633 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.83■□□□□ 0.44
CHMP2AO43633 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP2AO43633 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.83■□□□□ 0.44
CHMP2AO43633 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.83■□□□□ 0.44
CHMP2AO43633 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.83■□□□□ 0.44
CHMP2AO43633 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.83■□□□□ 0.44
CHMP2AO43633 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.83■□□□□ 0.44
CHMP2AO43633 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP2AO43633 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP2AO43633 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP2AO43633 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP2AO43633 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP2AO43633 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.82■□□□□ 0.44
CHMP2AO43633 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.82■□□□□ 0.44
CHMP2AO43633 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP2AO43633 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.82■□□□□ 0.44
CHMP2AO43633 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP2AO43633 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CHMP2AO43633 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.82■□□□□ 0.44
CHMP2AO43633 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP2AO43633 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP2AO43633 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP2AO43633 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CHMP2AO43633 PIN1P1-201ENST00000412108 996 ntBASIC17.82■□□□□ 0.44
CHMP2AO43633 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP2AO43633 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.82■□□□□ 0.44
CHMP2AO43633 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.82■□□□□ 0.44
CHMP2AO43633 TPRX2P-201ENST00000535362 881 ntBASIC17.82■□□□□ 0.44
CHMP2AO43633 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.82■□□□□ 0.44
CHMP2AO43633 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.82■□□□□ 0.44
CHMP2AO43633 AC097359.3-201ENST00000603982 1210 ntBASIC17.82■□□□□ 0.44
CHMP2AO43633 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.82■□□□□ 0.44
CHMP2AO43633 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP2AO43633 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP2AO43633 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CHMP2AO43633 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.82■□□□□ 0.44
CHMP2AO43633 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
CHMP2AO43633 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP2AO43633 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP2AO43633 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP2AO43633 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP2AO43633 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP2AO43633 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CHMP2AO43633 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP2AO43633 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.81■□□□□ 0.44
CHMP2AO43633 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CHMP2AO43633 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.81■□□□□ 0.44
CHMP2AO43633 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP2AO43633 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP2AO43633 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.81■□□□□ 0.44
CHMP2AO43633 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.81■□□□□ 0.44
CHMP2AO43633 AL139384.1-201ENST00000612143 3047 ntBASIC17.81■□□□□ 0.44
CHMP2AO43633 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
CHMP2AO43633 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP2AO43633 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP2AO43633 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP2AO43633 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP2AO43633 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP2AO43633 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.81■□□□□ 0.44
CHMP2AO43633 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.81■□□□□ 0.44
CHMP2AO43633 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CHMP2AO43633 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CHMP2AO43633 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.81■□□□□ 0.44
CHMP2AO43633 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
CHMP2AO43633 AC023310.3-201ENST00000557027 670 ntBASIC17.81■□□□□ 0.44
CHMP2AO43633 AC100756.1-201ENST00000562736 682 ntBASIC17.81■□□□□ 0.44
CHMP2AO43633 AC138749.3-201ENST00000567691 622 ntBASIC17.81■□□□□ 0.44
CHMP2AO43633 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.81■□□□□ 0.44
CHMP2AO43633 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP2AO43633 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.81■□□□□ 0.44
CHMP2AO43633 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP2AO43633 AC116165.1-201ENST00000611806 668 ntBASIC17.81■□□□□ 0.44
CHMP2AO43633 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP2AO43633 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP2AO43633 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP2AO43633 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CHMP2AO43633 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CHMP2AO43633 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP2AO43633 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP2AO43633 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CHMP2AO43633 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP2AO43633 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.8■□□□□ 0.44
CHMP2AO43633 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.8■□□□□ 0.44
CHMP2AO43633 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms